RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 NR2F6P10588 404 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 PKMP14618 531 aaKnown RBP19.06■□□□□ 0.64
UPF1-201ENST00000262803 PTPN2P17706 415 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 GALNT13Q8IUC8 556 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 PLD5Q8N7P1 536 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 S100ZQ8WXG8 99 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 DEFB118Q96PH6 123 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 NDST2P52849 883 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 TEX44Q53QW1 395 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 SDHAF4Q5VUM1 108 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 PLPP4Q5VZY2 271 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 AVL9Q8NBF6 648 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 TRPV3Q8NET8 790 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 TCF12Q99081 682 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 TMEM109Q9BVC6 243 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 TMEM27Q9HBJ8 222 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 DHRS12A0PJE2 317 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 FAUP35544 74 aaKnown RBP19.06■□□□□ 0.64
UPF1-201ENST00000262803 ERVK-21P61565 698 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 SPIBQ01892 262 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 GAD2Q05329 585 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 FASTKD3Q14CZ7 662 aaKnown RBP19.06■□□□□ 0.64
UPF1-201ENST00000262803 LARS2Q15031 903 aaKnown RBP19.06■□□□□ 0.64
UPF1-201ENST00000262803 ADAMTS15Q8TE58 950 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 ZNF354BQ96LW1 612 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 OSBPL11Q9BXB4 747 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 ELOVL2Q9NXB9 296 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 RSL24D1Q9UHA3 163 aaKnown RBP19.06■□□□□ 0.64
UPF1-201ENST00000262803 AP4B1Q9Y6B7 739 aa19.06■□□□□ 0.64
UPF1-201ENST00000262803 CA12O43570 354 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 OR10H3O60404 316 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 SHOX2O60902 331 aaPredicted RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 EIF2B2P49770 351 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 FOLH1Q04609 750 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 PTP4A2Q12974 167 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 WDR55Q9H6Y2 383 aaPredicted RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 POLMQ9NP87 494 aaPredicted RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 PCDHGC3Q9UN70 934 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 ASB3Q9Y575 518 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 DHX15O43143 795 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 CHST10O43529 356 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TACR2P21452 398 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 SLC7A2P52569 658 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TAS2R41P59536 307 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 ILF3Q12906 894 aaKnown RBP eCLIP19.05■□□□□ 0.643e-9■□□□□ 8.5
UPF1-201ENST00000262803 INAVAQ3KP66 663 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 FNBP1LQ5T0N5 605 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 ARHGAP36Q6ZRI8 547 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 CHST9Q7L1S5 443 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 A0A1B0GVM2 712 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TCAF2A6NFQ2 919 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 GLTPD2A6NH11 291 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 AGPSO00116 658 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 POP4O95707 220 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 LYNP07948 512 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 LINC00032P0C843 101 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 HSD17B2P37059 387 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 OMPP47874 163 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TRAP1Q12931 704 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 FAM43BQ6ZT52 329 aaPredicted RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 UXS1Q8NBZ7 420 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 OR52E6Q96RD3 313 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TDRD1Q9BXT4 1180 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 BTBD3Q9Y2F9 522 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 RIPK3Q9Y572 518 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 ERAL1O75616 437 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 MANFP55145 182 aaKnown RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 BNIP1Q12981 228 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 TRIM32Q13049 653 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 LACTB2Q53H82 288 aaPredicted RBP19.05■□□□□ 0.64
UPF1-201ENST00000262803 OR7A2PQ8NGA2 310 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 OR10G6Q8NH81 332 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 SPOCK2Q92563 424 aa19.05■□□□□ 0.64
UPF1-201ENST00000262803 A0A1W2PQH9 124 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 UNCXA6NJT0 531 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 UGT2B17O75795 530 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 CAPGP40121 348 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 ARFIP1P53367 373 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 VPS26BQ4G0F5 336 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 CNSTQ6PJW8 725 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 FITM2Q8N6M3 262 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 RTKNQ9BST9 563 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 SGK2Q9HBY8 427 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 TMCC2O75069 709 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 UGT2B11O75310 529 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 BLKP51451 505 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 MYBPC1Q00872 1141 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 TAF10Q12962 218 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 KBTBD2Q8IY47 623 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 TBC1D21Q8IYX1 336 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 ZNF563Q8TA94 476 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 BRSK1Q8TDC3 778 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 KLHL5Q96PQ7 755 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 TRAF6Q9Y4K3 522 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 LOC100506127A0A0U1RQW1 187 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 SMIM28A0A1B0GU29 152 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 FOXO6A8MYZ6 492 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 TSC22D2O75157 780 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 CCNFP41002 786 aa19.04■□□□□ 0.64
UPF1-201ENST00000262803 KLF10Q13118 480 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms