RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 MAGEA10P43363 369 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 RGRP47804 291 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 GATMP50440 423 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ADARP55265 1226 aaKnown RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 PIGFQ07326 219 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 TUSC3Q13454 348 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 XKR5Q6UX68 686 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 GPR141Q7Z602 305 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CHERPQ8IWX8 916 aaKnown RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 FIBCD1Q8N539 461 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 OR52B6Q8NGF0 335 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 OSBPL11Q9BXB4 747 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SMOC2Q9H3U7 446 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 POLR1BQ9H9Y6 1135 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ZFP14Q9HCL3 533 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CSNK1G1Q9HCP0 422 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CIDEBQ9UHD4 219 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 DOLKQ9UPQ8 538 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ZFC3H1O60293 1989 aaKnown RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 TRIM24O15164 1050 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ZNF37AP17032 561 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CTPS1P17812 591 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ENTPD1P49961 510 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 PSMD7P51665 324 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 INPP5AQ14642 412 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 BRMS1LQ5PSV4 323 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CLEC4FQ8N1N0 589 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 FBXO30Q8TB52 745 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-201ENST00000262544 DPF3Q92784 378 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 LRRC58Q96CX6 371 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 UBXN10Q96LJ8 280 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 RANBP9Q96S59 729 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 ADI1Q9BV57 179 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SUN2Q9UH99 717 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 SPO11Q9Y5K1 396 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 CEPT1Q9Y6K0 416 aa12.88□□□□□ -0.35
SEC23B-201ENST00000262544 MMP2P08253 660 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 LBPP18428 481 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 GPX3P22352 226 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 HSPA13P48723 471 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 LIPEQ05469 1076 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 DUSP4Q13115 394 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 HERC3Q15034 1050 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 FAM171BQ6P995 826 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 TICAM1Q8IUC6 712 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 FIG4Q92562 907 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 FAR2Q96K12 515 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 TCF12Q99081 682 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 POLR1EQ9GZS1 481 aaKnown RBP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 CCDC90BQ9GZT6 254 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ALG2Q9H553 416 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 CCDC154A6NI56 674 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ECI2O75521 394 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ASGR1P07306 291 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 SERPINF2P08697 491 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 HOXD8P13378 290 aaPredicted RBP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 GDF5P43026 501 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 UGT3A2Q3SY77 523 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ANKDD1AQ495B1 522 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 HS3ST5Q8IZT8 346 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 LZICQ8WZA0 190 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ING2Q9H160 280 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 GKN1Q9NS71 199 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 GIT1Q9Y2X7 761 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 SLC6A2P23975 617 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ELK4P28324 431 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 PCBP1Q15365 356 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 DUS1LQ6P1R4 473 aaKnown RBP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 IL27RAQ6UWB1 636 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 EEF1AKMT1Q8WVE0 214 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 TM6SF2Q9BZW4 377 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 CLK4Q9HAZ1 481 aaKnown RBP12.87□□□□□ -0.35
SEC23B-201ENST00000262544 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 MYLKQ15746 1914 aa12.87□□□□□ -0.35
SEC23B-201ENST00000262544 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 SH3BGRLO75368 114 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 ELNP15502 786 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 GSK3BP49841 420 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 IMPG1Q17R60 797 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 ANKS6Q68DC2 871 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 FAM45BPQ6NSW5 357 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 TMEM26Q6ZUK4 368 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 FRA10AC1Q70Z53 315 aa12.86□□□□□ -0.35
SEC23B-201ENST00000262544 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms