RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FGF18O76093 207 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 GJB5O95377 273 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PAMP19021 973 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PLK1P53350 603 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PLOD1Q02809 727 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 PITRM1Q5JRX3 1037 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 KIAA0930Q6ICG6 404 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 DUS1LQ6P1R4 473 aaKnown RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 UBE2Q1Q7Z7E8 422 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 CLVS1Q8IUQ0 354 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-201ENST00000250448 GLOD4Q9HC38 313 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 CROCCQ5TZA2 2017 aa16.92■□□□□ 0.3
FOXA1-201ENST00000250448 TRIM64CA6NLI5 447 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 SCAMP3O14828 347 aaKnown RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ATP4BP51164 291 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 KCNQ1P51787 676 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ESRRGP62508 458 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 FPGSQ05932 587 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF33AQ06730 810 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 PLD1Q13393 1074 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 AGAP9Q5VTM2 703 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 CCDC117Q8IWD4 279 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 BBS5Q8N3I7 341 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 PACRGLQ8N7B6 248 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 MFSD2AQ8NA29 543 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 OLFM1Q99784 485 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 PLGRKTQ9HBL7 147 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TREX1Q9NSU2 369 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 AFF4Q9UHB7 1163 aaKnown RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 MTF2Q9Y483 593 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 KIAA1671Q9BY89 1806 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 PRRG1O14668 218 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TEX28O15482 410 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 MT-CO1P00395 513 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 RPL10P27635 214 aaKnown RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 STT3AP46977 705 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 SEPT6Q14141 434 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TFAP2DQ7Z6R9 452 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF786Q8N393 782 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ATPAF2Q8N5M1 289 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TTC16Q8NEE8 873 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TNIP2Q8NFZ5 429 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ISOC1Q96CN7 298 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF419Q96HQ0 510 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 OSBPL6Q9BZF3 934 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 EBF1Q9UH73 591 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TLR6Q9Y2C9 796 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 YIPF1Q9Y548 306 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ABLIM3O94929 683 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 GEMP55040 296 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 STX1BP61266 288 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZBED5Q49AG3 693 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 BRMS1LQ5PSV4 323 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TMEM240Q5SV17 173 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ARTNQ5T4W7 220 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 FAM219BQ5XKK7 198 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF554Q86TJ5 538 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 DDX53Q86TM3 631 aaKnown RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 CIR1Q86X95 450 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ROPN1LQ96C74 230 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 SLC39A13Q96H72 371 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 GSTO2Q9H4Y5 243 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 SMOXQ9NWM0 555 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNHIT2Q9UHR6 403 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF510Q9Y2H8 683 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
FOXA1-201ENST00000250448 E9PAM4 449 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 EFCAB14O75071 495 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 BAIAP3O94812 1187 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 MYF6P23409 242 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CCNCP24863 283 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 ACADVLP49748 655 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 NME5P56597 212 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TWF1Q12792 350 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 SMARCB1Q12824 385 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TBCELQ5QJ74 424 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 INTS11Q5TA45 600 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CLEC6AQ6EIG7 209 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 NEPROQ6NW34 567 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 MSANTD2Q6P1R3 559 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TTC33Q6PID6 262 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CBR4Q8N4T8 237 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 LZTR1Q8N653 840 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 C2orf15Q8WU43 125 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 PHF21BQ96EK2 531 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 MYEOVQ96EZ4 313 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CCM2LQ9NUG4 571 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 RBP1P09455 135 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 GNAO1P09471 354 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 ADRA1AP35348 466 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 CHRNA4P43681 627 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TUFMP49411 452 aaKnown RBP16.9■□□□□ 0.3
FOXA1-201ENST00000250448 ENTPD1P49961 510 aa16.9■□□□□ 0.3
FOXA1-201ENST00000250448 TAF12Q16514 161 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms