RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 S100A12P80511 92 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 TXNL4AP83876 142 aaKnown RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 ZMYND11Q15326 602 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 KCTD19Q17RG1 926 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 HECTD3Q5T447 861 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 ZNF662Q6ZS27 426 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 FBXO33Q7Z6M2 555 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 GTF3C2Q8WUA4 911 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 KAT2AQ92830 837 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 MRPL45Q9BRJ2 306 aaKnown RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 CDADC1Q9BWV3 514 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 ALG2Q9H553 416 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 BPIFA1Q9NP55 256 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 DNAJC28Q9NX36 388 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 NEO1Q92859 1461 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 CRHR1P34998 444 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 GNA12Q03113 381 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 TCEA2Q15560 299 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 LINGO1Q96FE5 620 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 LENG8Q96PV6 779 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 PREBQ9HCU5 417 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 GPN3Q9UHW5 284 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 FBXO9Q9UK97 447 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 LAMC1P11047 1609 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 NOL4O94818 638 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 ITGB1P05556 798 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 C2P06681 752 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 GSTT2BP0CG30 244 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SLC26A2P50443 739 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 BMT2Q1RMZ1 405 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 TMEM119Q4V9L6 283 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 C4orf46Q504U0 113 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 LINGO2Q7L985 606 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 ANKRD52Q8NB46 1076 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 INO80EQ8NBZ0 244 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-201ENST00000240185 COQ10BQ9H8M1 238 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 RNF181Q9P0P0 153 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
TARDBP-201ENST00000240185 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 CALCAP01258 141 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 TRBC1P01850 177 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 EGFL6Q8IUX8 553 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 CLIP4Q8N3C7 705 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 PGLYRP2Q96PD5 576 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 TCF25Q9BQ70 676 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 ATPIF1Q9UII2 106 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 C5orf51A6NDU8 294 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 FGBP02675 491 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 OGNP20774 298 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 RORCP51449 518 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 PFKPQ01813 784 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 SRSF11Q05519 484 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 PPP1R26Q5T8A7 1209 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 ADNP2Q6IQ32 1131 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 TMIEQ8NEW7 156 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 MGME1Q9BQP7 344 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 ELOVL4Q9GZR5 314 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 KIR3DL1P43629 444 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 PPP3CAQ08209 521 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 C12orf43Q96C57 262 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 SH3D21A4FU49 640 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 OR1I1O60431 355 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 IDNKQ5T6J7 187 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 TMEM214Q6NUQ4 689 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 QSOX2Q6ZRP7 698 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 ZNF350Q9GZX5 532 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
TARDBP-201ENST00000240185 KIF1BO60333 1816 aa13.79□□□□□ -0.2
TARDBP-201ENST00000240185 LACTBL1A8MY62 500 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 HOXA2O43364 376 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 TULP3O75386 442 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 SLITRK3O94933 977 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 POMCP01189 267 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 GIMD1P0DJR0 217 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 PITPNAQ00169 270 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 RPL6Q02878 288 aaKnown RBP13.78□□□□□ -0.2
TARDBP-201ENST00000240185 BNIP3Q12983 259 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 SEC23AQ15436 765 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 RAB12Q6IQ22 244 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
TARDBP-201ENST00000240185 CACUL1Q86Y37 369 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms