RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SYT12Q8IV01 421 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 NEDD1Q8NHV4 660 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 RDH11Q8TC12 318 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 LRRN4Q8WUT4 740 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 NAT9Q9BTE0 207 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 BRF2Q9HAW0 419 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ITSN1Q15811 1721 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 A6NL46 340 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 AURKAO14965 403 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 VIPP01282 170 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 UGT2B15P54855 530 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 VGLL4Q14135 290 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 RIT2Q99578 217 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 GANQ9H2C0 597 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 GLUD1P00367 558 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 CYP11B1P15538 503 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 KLRK1P26718 216 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 OXR1Q8N573 874 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BRD7Q9NPI1 651 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 DUS2Q9NX74 493 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BTN3A1O00481 513 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 MICAL2O94851 1124 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 CASRP41180 1078 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 ACADVLP49748 655 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 RTP1P59025 263 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 HSPBAP1Q96EW2 488 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 PTPN18Q99952 460 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 KCNQ5Q9NR82 932 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 NINJ2Q9NZG7 142 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 CLDN5O00501 218 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FFAR3O14843 346 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 GPR42O15529 346 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 LRIG2O94898 1065 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 NUDT7P0C024 238 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 ELFN1P0C7U0 828 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 UBE2R2Q712K3 238 aaPredicted RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 ATG9AQ7Z3C6 839 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 OR56A4Q8NGH8 313 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SLC47A1Q96FL8 570 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 ETNK2Q9NVF9 386 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FABP12A6NFH5 140 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SSX4O60224 188 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BMP7P18075 431 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FNTBP49356 437 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 RPL14P50914 215 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 AP3S2P59780 193 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BNIP2Q12982 314 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 STILQ15468 1287 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 ZNF484Q5JVG2 852 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SLC9A9Q8IVB4 645 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 OR8D1Q8WZ84 308 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BAP1Q92560 729 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TKTL2Q9H0I9 626 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 NDUFAF4Q9P032 175 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TMED5Q9Y3A6 229 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 MYO18AQ92614 2054 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 AFDNP55196 1824 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 QRICH2Q9H0J4 1663 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SLC25A14O95258 325 aaPredicted RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 RPA4Q13156 261 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 MTFR2Q6P444 385 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TAS1R3Q7RTX0 852 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 NETO2Q8NC67 525 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 PDPRQ8NCN5 879 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 C12orf66Q96MD2 445 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FCRL4Q96PJ5 515 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SLC39A1Q9NY26 324 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 UMODL1Q5DID0 1318 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TVP23AA6NH52 213 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 A8MV72 311 aaPredicted RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 RSL1D1O76021 490 aaKnown RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 CASP6P55212 293 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TGFB2P61812 414 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FAM91A1Q658Y4 838 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 TEX47Q8TBZ9 253 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 BPIFB1Q8TDL5 484 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 SLC5A5Q92911 643 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 PRR11Q96HE9 360 aaPredicted RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 APBA2Q99767 749 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 LACRTQ9GZZ8 138 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 CXorf21Q9HAI6 301 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 MOCS1Q9NZB8 636 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
MSH6-201ENST00000234420 PCDHB3Q9Y5E6 796 aa11.06□□□□□ -0.64
MSH6-201ENST00000234420 HMGCRP04035 888 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 BCAT1P54687 386 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SNRPD1P62314 119 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 PRAMEF17Q5VTA0 474 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms