RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 EFL1Q7Z2Z2 1120 aaKnown RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 PTGR2Q8N8N7 351 aaPredicted RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ADAMTS19Q8TE59 1207 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.77■□□□□ 0.272e-7■■□□□ 14.4
GAPDH-201ENST00000229239 ACDQ96AP0 544 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ALG14Q96F25 216 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ZNF184Q99676 751 aaPredicted RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 C2orf49Q9BVC5 232 aaPredicted RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 MRPL1Q9BYD6 325 aaKnown RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ANKRD36A6QL64 1941 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 SNAP91O60641 907 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MTHFD2P13995 350 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MZF1P28698 734 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 FMO4P31512 558 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MC4RP32245 332 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PTGER3P43115 390 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 CCNIQ14094 377 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 OR4D1Q15615 310 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 CCDC85BQ15834 202 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 ZFP1Q6P2D0 407 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 FIBCD1Q8N539 461 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PNPLA1Q8N8W4 532 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MRPS31Q92665 395 aaKnown RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 C1QTNF3Q9BXJ4 246 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 VPS51Q9UID3 782 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MED16Q9Y2X0 877 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 CPQQ9Y646 472 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 WASF2Q9Y6W5 498 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PRRC2BQ5JSZ5 2229 aaKnown RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 UBFD1O14562 309 aaKnown RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 STX16O14662 325 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 LILRB3O75022 631 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PDE5AO76074 875 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 ESR1P03372 595 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 CSKP41240 450 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 SLC7A9P82251 487 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MRPS35P82673 323 aaKnown RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PPM1LQ5SGD2 360 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 ARMC12Q5T9G4 340 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 IRGCQ6NXR0 463 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PAQR3Q6TCH7 311 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 LINGO4Q6UY18 593 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 APLFQ8IW19 511 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 ARL14EPQ8N8R7 260 aaPredicted RBP16.76■□□□□ 0.27
GAPDH-201ENST00000229239 KCNJ9Q92806 393 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 RCN3Q96D15 328 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 SAMD11Q96NU1 681 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 BIRC8Q96P09 236 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 TTC1Q99614 292 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 FKBPLQ9UIM3 349 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 RNF112Q9ULX5 631 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 PKP3Q9Y446 797 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 MTCH2Q9Y6C9 303 aa16.76■□□□□ 0.27
GAPDH-201ENST00000229239 ANAPC1Q9H1A4 1944 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 H3BMM5 538 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 TEX28O15482 410 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 KLK8O60259 260 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 ABL2P42684 1182 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 CACNG1Q06432 222 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 GSTA3Q16772 222 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 PTPRNQ16849 979 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 SETMARQ53H47 684 aaPredicted RBP16.75■□□□□ 0.27
GAPDH-201ENST00000229239 HPS6Q86YV9 775 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 TMEM126BQ8IUX1 230 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 RYBPQ8N488 228 aaPredicted RBP16.75■□□□□ 0.27
GAPDH-201ENST00000229239 SH3RF2Q8TEC5 729 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 DLG3Q92796 817 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 SLC25A23Q9BV35 468 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 IL17CQ9P0M4 197 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 G3BP2Q9UN86 482 aaKnown RBP16.75■□□□□ 0.27
GAPDH-201ENST00000229239 ZNF711Q9Y462 761 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 PCDHB1Q9Y5F3 818 aa16.75■□□□□ 0.27
GAPDH-201ENST00000229239 PSMD12O00232 456 aaPredicted RBP16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PGLSO95336 258 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 GFAPP14136 432 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 HMGCLP35914 325 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PSMD8P48556 350 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 STX1BP61266 288 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PEX6Q13608 980 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 BLMHQ13867 455 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 UGT3A2Q3SY77 523 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PIGGQ5H8A4 983 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 HACD2Q6Y1H2 254 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 LARP4Q71RC2 724 aaKnown RBP eCLIP16.74■□□□□ 0.272e-29■■□□□ 13.9
GAPDH-201ENST00000229239 DHDDSQ86SQ9 333 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
GAPDH-201ENST00000229239 FBXO39Q8N4B4 442 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 EFHBQ8N7U6 833 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 SLC26A7Q8TE54 656 aa16.74■□□□□ 0.27
GAPDH-201ENST00000229239 C19orf60Q96EN9 201 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms