RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PPTC7Q8NI37 304 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 SLC22A17Q8WUG5 538 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 TUBGCP3Q96CW5 907 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 ING2Q9H160 280 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 ATXN3LQ9H3M9 355 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 MID1IP1Q9NPA3 183 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 GIT1Q9Y2X7 761 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 CSADQ9Y600 493 aa13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-201ENST00000228916 MATN3O15232 486 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ALPLP05186 524 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ZFP36L2P47974 494 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 DAG1Q14118 895 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 RPS6KA2Q15349 733 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ZIK1Q3SY52 487 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 OTUD3Q5T2D3 398 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 KIAA0319Q5VV43 1072 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 THAP5Q7Z6K1 395 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 TTC30BQ8N4P2 665 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 PNPLA1Q8N8W4 532 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 CCDC138Q96M89 665 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 SEPHS2Q99611 448 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 TYW5A2RUC4 315 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 EEDO75530 441 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 JRKO75564 520 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HLA-DQB2P05538 268 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 GSTT2P0CG29 244 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 GSTT2BP0CG30 244 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HPCAL1P37235 193 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ADCYAP1R1P41586 468 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 LILRA4P59901 499 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 PAGE3Q5JUK9 113 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 LDLRAP1Q5SW96 308 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 TMEM214Q6NUQ4 689 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 BHLHA9Q7RTU4 235 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 CATSPER4Q7RTX7 472 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 PROSER1Q86XN7 944 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 PTGR2Q8N8N7 351 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 MINDY2Q8NBR6 621 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 GABPB2Q8TAK5 448 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 SGCDQ92629 289 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HDAC2Q92769 488 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 BTN2A3PQ96KV6 586 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 MED10Q9BTT4 135 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 FUNDC2Q9BWH2 189 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 FAM49AQ9H0Q0 323 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HPS4Q9NQG7 708 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 SLC27A5Q9Y2P5 690 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 H3BMM5 538 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HTR1AP08908 422 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 USP17L7P0C7H9 530 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 THRBP10828 461 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 DIO3P55073 304 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 RAB41Q5JT25 222 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ZNF362Q5T0B9 420 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 ZNF772Q68DY9 489 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 LINC00299Q6ZSB3 139 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 SULF1Q8IWU6 871 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 CADM3Q8N126 398 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 HMG20AQ9NP66 347 aa13.93□□□□□ -0.18
SCNN1A-201ENST00000228916 CEP350Q5VT06 3117 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 SIX3O95343 332 aaPredicted RBP13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 PRR35P0CG20 571 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 GRIK2Q13002 908 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 KDELC2Q7Z4H8 507 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 PIM3Q86V86 326 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 OR13J1Q8NGT2 312 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 TEX37Q96LM6 180 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 RNF145Q96MT1 663 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 KCNA7Q96RP8 456 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 OSMRQ99650 979 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 SMOQ99835 787 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 WDR12Q9GZL7 423 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 ARNT2Q9HBZ2 717 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 ENPP5Q9UJA9 477 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 USP22Q9UPT9 525 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 VPS4BO75351 444 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 CDH1P12830 882 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 KCNE1P15382 129 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 CD1DP15813 335 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 TCF3P15923 654 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 KCNK10P57789 538 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 OCA2Q04671 838 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 GEN1Q17RS7 908 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 XKR4Q5GH76 650 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 EDEM1Q92611 657 aa13.92□□□□□ -0.18
SCNN1A-201ENST00000228916 MUL1Q969V5 352 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms