RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PCDHGA8Q9Y5G5 932 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 FAM95CA0A1B0GW59 222 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
SF1-201ENST00000227503 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
SF1-201ENST00000227503 CRHBPP24387 322 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 ARL1P40616 181 aaPredicted RBP14.05□□□□□ -0.16
SF1-201ENST00000227503 LEPRP48357 1165 aaKnown RBP14.05□□□□□ -0.16
SF1-201ENST00000227503 TAF6P49848 677 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 KCTD11Q693B1 232 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 FRA10AC1Q70Z53 315 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 STK32CQ86UX6 486 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
SF1-201ENST00000227503 CLEC4FQ8N1N0 589 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 WNT8BQ93098 351 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 NRBF2Q96F24 287 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 TNIP3Q96KP6 325 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 TUBA1CQ9BQE3 449 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 MCMBPQ9BTE3 642 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 HOXD1Q9GZZ0 328 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 SLC2A6Q9UGQ3 507 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 BOLA1Q9Y3E2 137 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 PCDHB3Q9Y5E6 796 aa14.05□□□□□ -0.16
SF1-201ENST00000227503 CCDC162PA2VCL2 907 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 DLGAP3O95886 979 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 FYNP06241 537 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 APOA4P06727 396 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ENO2P09104 434 aaPredicted RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 DARSP14868 501 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 NPR3P17342 541 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ERCC2P18074 760 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 SERPINB1P30740 379 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 PNPLA4P41247 253 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 GP2P55259 537 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 ARPC4P59998 168 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 NCS1P62166 190 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 RACK1P63244 317 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 PLIN5Q00G26 463 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 SEMA3BQ13214 749 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 LAPTM5Q13571 262 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 CTU2Q2VPK5 515 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 ADPRMQ3LIE5 342 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 RBM20Q5T481 1227 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 SPATC1Q76KD6 591 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 AKAP14Q86UN6 197 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 PPP1R13LQ8WUF5 828 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 KCTD13Q8WZ19 329 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 KCNA7Q96RP8 456 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 SGIP1Q9BQI5 828 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 IFT52Q9Y366 437 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 PDCD11Q14690 1871 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 LRRC14BA6NHZ5 514 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 KCNE1P15382 129 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 WARSP23381 471 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 ADRA1BP35368 520 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 GJA5P36382 358 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 PIGAP37287 484 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 RABGGTBP53611 331 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ATP6V0D1P61421 351 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ECT2LQ008S8 904 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ZNF789Q5FWF6 425 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 MMAAQ8IVH4 418 aaKnown RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 NUDT8Q8WV74 236 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ZNF486Q96H40 463 aaPredicted RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 PAK1IP1Q9NWT1 392 aaPredicted RBP14.04□□□□□ -0.16
SF1-201ENST00000227503 TBC1D14Q9P2M4 693 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 STAP1Q9ULZ2 295 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 INVSQ9Y283 1065 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 CEP350Q5VT06 3117 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 TSC2P49815 1807 aa14.04□□□□□ -0.16
SF1-201ENST00000227503 ANGPT2O15123 496 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 XPNPEP2O43895 674 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 LDLRP01130 860 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 NFKB1P19838 968 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 CYP2B6P20813 491 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 GPX3P22352 226 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 GSK3BP49841 420 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.03□□□□□ -0.167e-15■□□□□ 8.7
SF1-201ENST00000227503 CLEC20AQ6ZU45 233 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 KIAA0408Q6ZU52 694 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 NPWQ8N729 165 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 EFHD2Q96C19 240 aaPredicted RBP14.03□□□□□ -0.16
SF1-201ENST00000227503 CDCA5Q96FF9 252 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 AKTIPQ9H8T0 292 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 WDR6Q9NNW5 1121 aaKnown RBP14.03□□□□□ -0.16
SF1-201ENST00000227503 MIA3Q5JRA6 1907 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 AQP12BA6NM10 295 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 A8MT66 165 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 M0R3G1 203 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 SUPT7LO94864 414 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 KCNK2O95069 426 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 PARNO95453 639 aaKnown RBP14.03□□□□□ -0.16
SF1-201ENST00000227503 STMN1P16949 149 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 MAP2K4P45985 399 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 CSRP3P50461 194 aa14.03□□□□□ -0.16
SF1-201ENST00000227503 FOXA1P55317 472 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms