RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.24
RAB3D-201ENST00000222120 FAM120BQ96EK7 910 aaKnown RBP13.52□□□□□ -0.24
RAB3D-201ENST00000222120 SMIM14Q96QK8 99 aa13.52□□□□□ -0.24
RAB3D-201ENST00000222120 POLR3HQ9Y535 204 aaPredicted RBP13.52□□□□□ -0.24
RAB3D-201ENST00000222120 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 OR6B1O95007 311 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.25
RAB3D-201ENST00000222120 PGFP49763 221 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 CDKN2DP55273 166 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 SH2D5Q6ZV89 423 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 CLDN19Q8N6F1 224 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 TSGA13Q96PP4 275 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAB3D-201ENST00000222120 U3KQV3 271 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 EVPLLA8MZ36 301 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 HOXA2O43364 376 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 HNRNPRO43390 633 aaKnown RBP13.52□□□□□ -0.25
RAB3D-201ENST00000222120 GRID2O43424 1007 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 MS4A2Q01362 244 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 PPP1R8Q12972 351 aaKnown RBP13.52□□□□□ -0.25
RAB3D-201ENST00000222120 PDSS2Q86YH6 399 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 IL12RB2Q99665 862 aa13.52□□□□□ -0.25
RAB3D-201ENST00000222120 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 GSNP06396 782 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UGT1A6P19224 532 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UGT1A1P22309 533 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UGT1A4P22310 534 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 GLDCP23378 1020 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UGT1A3P35503 534 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UGT1A5P35504 534 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 AGTR2P50052 363 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 LCP2Q13094 533 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CRY1Q16526 586 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 RNF19BQ6ZMZ0 732 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 LRRC8DQ7L1W4 858 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CACUL1Q86Y37 369 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 ARHGAP12Q8IWW6 846 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 KCNN1Q92952 543 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 YME1L1Q96TA2 773 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 PPP6CO00743 305 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CLDN11O75508 207 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 MYO1DO94832 1006 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 ALPIP09923 528 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 IDO1P14902 403 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 LRRC74AQ0VAA2 488 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 AP5B1Q2VPB7 878 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 USP41Q3LFD5 358 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 OTUD1Q5VV17 481 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 MED8Q96G25 268 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 BDH2Q9BUT1 245 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 FAM126AQ9BYI3 521 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 PCDHGB4Q9UN71 923 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 FOCADQ5VW36 1801 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 I6L893 689 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 PRMT5O14744 637 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 SLC25A14O95258 325 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 MLYCDO95822 493 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CAPN1P07384 714 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CKBP12277 381 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 DIO3P55073 304 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 C1QTNF8P60827 252 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 ATP6V0D1P61421 351 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 HERVK_113P63132 956 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 PRMT9Q6P2P2 845 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 RANBP10Q6VN20 620 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 SLC45A3Q96JT2 553 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 ERVK-6Q9BXR3 956 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 ZDHHC6Q9H6R6 413 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
RAB3D-201ENST00000222120 LEF1Q9UJU2 399 aaPredicted RBP13.51□□□□□ -0.25
RAB3D-201ENST00000222120 SLC38A8A6NNN8 435 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ULK1O75385 1050 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CDH15P55291 814 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 FAM98BQ52LJ0 330 aaKnown RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 MORN1Q5T089 497 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ARL14EPQ8N8R7 260 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 KDM1BQ8NB78 822 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SELENOMQ8WWX9 145 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 FUBP3Q96I24 572 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TCF12Q99081 682 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 MFSD1Q9H3U5 465 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 POLR3BQ9NW08 1133 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CFAP99D6REC4 459 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 OR1I1O60431 355 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms