RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PCDHGC3Q9UN70 934 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SATB2Q9UPW6 733 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 FCF1Q9Y324 198 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ATRNO75882 1429 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 FGFR3P22607 806 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 EPHA3P29320 983 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 STAT5AP42229 794 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 NDST2P52849 883 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 DUPD1Q68J44 220 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 UNC5BQ8IZJ1 945 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 CLEC4DQ8WXI8 215 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 PCDHB18PQ96TA0 734 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 CCDC177Q9NQR7 707 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 PCDHGC4Q9Y5F7 938 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 MYBPHLA2RUH7 354 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ASLP04424 464 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SLC25A3Q00325 362 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 DGCR6Q14129 220 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 C10orf107Q8IVU9 208 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 FAM98AQ8NCA5 519 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 EEF1AKMT1Q8WVE0 214 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 FUBP3Q96I24 572 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 C12orf42Q96LP6 360 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TSSK3Q96PN8 268 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 KCNN2Q9H2S1 579 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SRRDQ9UH36 339 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 RBM7Q9Y580 266 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 LRIG2O94898 1065 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ACTR3P61158 418 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 RAB30Q15771 203 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TSTD1Q8NFU3 115 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 RBPJLQ9UBG7 517 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ERGIC3Q9Y282 383 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ASMTP46597 345 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CACNA2D1P54289 1103 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 MSANTD2Q6P1R3 559 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CUZD1Q86UP6 607 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 PYDC1Q8WXC3 89 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 GBA3Q9H227 469 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TSC22D2O75157 780 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TNFRSF8P28908 595 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TAF5Q15542 800 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 ZSWIM7Q19AV6 140 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 KLHL12Q53G59 568 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 IRGCQ6NXR0 463 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TMC8Q8IU68 726 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 SNRNP27Q8WVK2 155 aaKnown RBP18.86■□□□□ 0.61
SMPD3-201ENST00000219334 KLHL25Q9H0H3 589 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TSC22D4Q9Y3Q8 395 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CAMTA1Q9Y6Y1 1673 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 VARSP26640 1264 aaKnown RBP18.86■□□□□ 0.61
SMPD3-201ENST00000219334 HNRNPH3P31942 346 aaKnown RBP18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CYP4F8P98187 520 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 GBE1Q04446 702 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 FUT2Q10981 343 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 PDK4Q16654 411 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 RTL4Q6ZR62 310 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 MYDGFQ969H8 173 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 DGCR6LQ9BY27 220 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 DPEP3Q9H4B8 488 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 DIABLOQ9NR28 239 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CMTM6Q9NX76 183 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CST1P01037 141 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 ZNF155Q12901 538 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-201ENST00000219334 NRF1Q16656 503 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 BPIFB6Q8NFQ5 453 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 KLHL32Q96NJ5 620 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 GPR21Q99679 349 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 CDADC1Q9BWV3 514 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 IKZF4Q9H2S9 585 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 TOR4AQ9NXH8 423 aa18.86■□□□□ 0.61
SMPD3-201ENST00000219334 MATN3O15232 486 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ZMPSTE24O75844 475 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 PIAS1O75925 651 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 RPIAP49247 311 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 KLHL24Q6TFL4 600 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 SLC43A3Q8NBI5 491 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 DHX15O43143 795 aaKnown RBP18.85■□□□□ 0.61
SMPD3-201ENST00000219334 COL6A2P12110 1019 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ADSLP30566 484 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-201ENST00000219334 ACAP2Q15057 778 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 DDI2Q5TDH0 399 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 CHST15Q7LFX5 561 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-201ENST00000219334 KRT74Q7RTS7 529 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 PLD5Q8N7P1 536 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 RTL3Q8N8U3 475 aaKnown RBP18.85■□□□□ 0.61
SMPD3-201ENST00000219334 NEK7Q8TDX7 302 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 HMCESQ96FZ2 354 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 TBATAQ96M53 351 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 PWWP2AQ96N64 755 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 LRTM1Q9HBL6 345 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 LRCH1Q9Y2L9 728 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 LOC100506127A0A0U1RQW1 187 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 GIMD1P0DJR0 217 aa18.85■□□□□ 0.61
SMPD3-201ENST00000219334 BMP6P22004 513 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms