RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ALPIP09923 528 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 IMPDH1P20839 514 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 FUT4P22083 530 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 IL10P22301 178 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 ELK4P28324 431 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 CLCQ05315 142 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 SAMD4BQ5PRF9 694 aaKnown RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 ANKRD46Q86W74 232 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 CLYBLQ8N0X4 340 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 CLEC4FQ8N1N0 589 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 RDH11Q8TC12 318 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 EGFL8Q99944 293 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 KCTD14Q9BQ13 255 aaPredicted RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 TDRD1Q9BXT4 1180 aaKnown RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 POLR1BQ9H9Y6 1135 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 RAD54BQ9Y620 910 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 WDR90Q96KV7 1748 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 J3QRK9 145 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 ECI2O75521 394 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 ATP5BP06576 529 aaKnown RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 HCAR3P49019 387 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TUSC3Q13454 348 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TAF12Q16514 161 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 IL27RAQ6UWB1 636 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TMCO2Q7Z6W1 182 aaPredicted RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 STK32CQ86UX6 486 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 CALML6Q8TD86 181 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 FBXL8Q96CD0 374 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 AURKBQ96GD4 344 aaPredicted RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 THUMPD3Q9BV44 507 aaKnown RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 DGCR6LQ9BY27 220 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 GPR62Q9BZJ7 368 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 UTS2RQ9UKP6 389 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 SMIM31A0A1B0GVY4 71 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 LDB2O43679 373 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 GJB5O95377 273 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 MMP2P08253 660 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 CTGFP29279 349 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 KCNK10P57789 538 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 HMGCS1Q01581 520 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 LIPEQ05469 1076 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TSTA3Q13630 321 aaPredicted RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 TIGD7Q6NT04 549 aaPredicted RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 GLB1LQ6UWU2 654 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 MBOAT1Q6ZNC8 495 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TMEM26Q6ZUK4 368 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 BNIPLQ7Z465 357 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 NCSTNQ92542 709 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 NCLNQ969V3 563 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 ISL2Q96A47 359 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 TSPAN17Q96FV3 270 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 NSMCE3Q96MG7 304 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 FAM210AQ96ND0 272 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 PAIP1Q9H074 479 aaKnown RBP15□□□□□ -0.01
EFNB1-201ENST00000204961 NEU3Q9UQ49 428 aa15□□□□□ -0.01
EFNB1-201ENST00000204961 A0A1W2PPW3 197 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ARPC2O15144 300 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 NPHS1O60500 1241 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CD1DP15813 335 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PSMA4P25789 261 aaKnown RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ALDH4A1P30038 563 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CLCN5P51795 746 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CASP9P55211 416 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 NR6A1Q15406 480 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 TAF2Q6P1X5 1199 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 BPIFB6Q8NFQ5 453 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 OR2T34Q8NGX1 318 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 OR2T3Q8NH03 318 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 IMP4Q96G21 291 aaKnown RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SERPINB11Q96P15 392 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PRDM16Q9HAZ2 1276 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PRDM8Q9NQV8 689 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 RAB26Q9ULW5 256 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 GNGT2O14610 69 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 LRATO95237 230 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 PRAMEF12O95522 483 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CDK4P11802 303 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CCND3P30281 292 aaPredicted RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 FLT3LGP49771 235 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CCR3P51677 355 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SELPLGQ14242 412 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 LPIN1Q14693 890 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ACAP2Q15057 778 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 XKR4Q5GH76 650 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 MRNIPQ6NTE8 343 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ST13P5Q8NFI4 369 aaPredicted RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 METTL6Q8TCB7 284 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 LINGO1Q96FE5 620 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 CDKN2AIPNLQ96HQ2 116 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 MTG1Q9BT17 334 aaPredicted RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 ZFP37Q9Y6Q3 630 aaPredicted RBP14.99□□□□□ -0.01
EFNB1-201ENST00000204961 DGKBQ9Y6T7 804 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 SERPINF2P08697 491 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 UGT1A1P22309 533 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 UGT1A4P22310 534 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 UGT1A3P35503 534 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 UGT1A5P35504 534 aa14.99□□□□□ -0.01
EFNB1-201ENST00000204961 OR4D2P58180 307 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms