RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TYW3Q6IPR3 259 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 GPSM1Q86YR5 675 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 HEXDCQ8WVB3 486 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 HBEGFQ99075 208 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ADGRE2Q9UHX3 823 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 PSME2Q9UL46 239 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 WBP11Q9Y2W2 641 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 H0Y858 1186 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 FFAR3O14843 346 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 GPR42O15529 346 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZBTB14O43829 449 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 RGS20O76081 388 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 RPLP2P05387 115 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 DNASE1L3Q13609 305 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 C10orf120Q5SQS8 335 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 GPR158Q5T848 1215 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ARHGAP17Q68EM7 881 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 UGT3A1Q6NUS8 523 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ESRP1Q6NXG1 681 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 PKN3Q6P5Z2 889 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF621Q6ZSS3 439 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SPATA22Q8NHS9 363 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 MRPL45Q9BRJ2 306 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 KLQ9UEF7 1012 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CRLS1Q9UJA2 301 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 TBC1D30Q9Y2I9 924 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 FAM25AB3EWG3 89 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 FAM25CB3EWG5 89 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 FAM25GB3EWG6 89 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 H3BMM5 538 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SCAMP3O14828 347 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CD3EAPO15446 510 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 DENRO43583 198 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 TKTP29401 623 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 NDUFV1P49821 464 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 MRPS5P82675 430 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 OLIG2Q13516 323 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 TGFBIQ15582 683 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 AARS2Q5JTZ9 985 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 DGKKQ5KSL6 1271 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CCDC149Q6ZUS6 474 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CHSY3Q70JA7 882 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC26A9Q7LBE3 791 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 KBTBD8Q8NFY9 601 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 KLHL32Q96NJ5 620 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 HMGXB4Q9UGU5 601 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF221Q9UK13 617 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 NDUFS2O75306 463 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ALDOAP04075 364 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SERPINF2P08697 491 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 HOXC6P09630 235 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 PORP16435 677 aaPredicted RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 HARS2P49590 506 aaKnown RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 NT5DC4Q86YG4 428 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 TTC30BQ8N4P2 665 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 TWIST2Q8WVJ9 160 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CLPBQ9H078 707 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 SOX17Q9H6I2 414 aaPredicted RBP11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 C8orf4Q9NR00 106 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 MAGEL2Q9UJ55 1249 aa11.49□□□□□ -0.57
DNMT3B-201ENST00000201963 CLDN5O00501 218 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 CCL22O00626 93 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TFAP2AP05549 437 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 IRF1P10914 325 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 GCAP28676 217 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 ADRA1BP35368 520 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 CD86P42081 329 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 RPL38P63173 70 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 C1DQ13901 141 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 NCF4Q15080 339 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TIMM50Q3ZCQ8 353 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 INO80DQ53TQ3 878 aaPredicted RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TMEM110Q86TL2 294 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KBTBD6Q86V97 674 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 PNPT1Q8TCS8 783 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TPK1Q9H3S4 243 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 MARCH7Q9H992 704 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 CNTN6Q9UQ52 1028 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 BCORQ6W2J9 1755 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 F8W810 466 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 FAM189A1O60320 539 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 NOBOXO60393 691 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 WBP4O75554 376 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms