RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Vmn2r14E9Q759 848 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Tpst2O88856 376 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 ItgalP24063 1163 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CryaaP24622 196 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cyp17a1P27786 507 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pdha1P35486 390 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Sipa1P46062 1037 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Kcnj9P48543 393 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gpc4P51655 557 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Aqp4P55088 323 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Lrrc3P59034 257 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Adra1dP97714 562 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cyp2c65Q148B1 490 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fbxw18Q3TSA9 469 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cage1Q5IR70 849 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Lemd2Q6DVA0 511 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Gpr17Q6NS65 339 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Krt73Q6NXH9 539 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rfx4Q7TNK1 735 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fam83eQ80XS7 481 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Tmem198Q8BG75 360 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Kyat1Q8BTY1 424 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Bmt2Q8BXK4 403 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pcdhb7Q8CDY9 829 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Glcci1Q8K3I9 537 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Tspan1Q99J59 240 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fndc8Q9D2H8 321 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ccdc70Q9D9B0 223 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Noa1Q9JJG9 693 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 RhoaQ9QUI0 193 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Keap1Q9Z2X8 624 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Kat6aQ8BZ21 2003 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 MgamB5THE2 1827 aa13.28□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Wdr49A0A0N4SUK7 710 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fam47eD3YWC7 402 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Zbtb10E9Q8X5 861 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Alkal1J3QPP8 127 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Aif1O70200 147 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cd3gP11942 182 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pou5f1P20263 352 aaKnown RBP13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Yap1P46938 488 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CartptP56388 129 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 IdsQ08890 552 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cog7Q3UM29 770 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Eif2b4Q61749 524 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fastkd1Q6DI86 829 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Nrg1Q6DR99 700 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ggnbp1Q6K1E7 370 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ckap2lQ7TS74 745 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Chil6Q80W26 440 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fam109aQ8BH49 266 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Prr11Q8BHE0 368 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Sit1Q8C503 180 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Aldh4a1Q8CHT0 562 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 SmtnQ921U8 923 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Mtfr1Q99MB2 328 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Nipsnap3bQ9CQE1 247 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pbld2Q9CXN7 288 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Acer3Q9D099 267 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 S100pbpQ9D5K4 396 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ndufa13Q9ERS2 144 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 CtsmQ9JL96 333 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Pkp3Q9QY23 797 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rgs20Q9QZB1 239 aa13.27□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Rp1P56716 2095 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tp53bp1P70399 1969 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Igkv10-94A0A075B5L1 115 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gm43518A0A0G2JGB6 165 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Igkv12-98A0A0G2JGF9 115 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gm12695A2AGB2 545 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Skint1A7TZE6 364 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gm2832F7AEC7 200 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pot1bH7BX60 640 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 AmacrO09174 381 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Azin1O35484 448 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Socs5O54928 536 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Akap10O88845 662 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Clec4fP70194 548 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 A1bgQ19LI2 512 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 H2-Q2Q4KN81 360 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Colgalt2Q6NVG7 625 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Kctd12Q6WVG3 327 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Lrp10Q7TQH7 713 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Atp2c1Q80XR2 918 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Nod1Q8BHB0 953 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ppm1lQ8BHN0 360 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Zfp595Q8BIN6 625 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Sfrp1Q8C4U3 314 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ftsj1Q8CBC7 324 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cnot6Q8K3P5 557 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Nae1Q8VBW6 534 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Clptm1Q8VBZ3 664 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tchhl1Q9D3P1 638 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Exoc2Q9D4H1 924 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tomm20lQ9D4V6 152 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Fam83dQ9D7I8 585 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Stx12Q9ER00 274 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pias4Q9JM05 507 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Slamf1Q9QUM4 343 aa13.27□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 PrebQ9WUQ2 417 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms