RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Creld1Q91XD7 420 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Pcdhga10Q91XY9 930 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Rpn2Q9DBG6 631 aaKnown RBP22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Ndrg2Q9QYG0 371 aaKnown RBP22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Asb4Q9WV71 426 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Pi4kaE9Q3L2 2105 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Igkv6-29A0A0G2JEI6 115 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 4930469K13RikA0A286YDB2 92 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Tcte1A6H639 498 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Osbpl8B9EJ86 889 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Zfp169E9Q3R6 731 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Gm3488M0QW81 238 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Stam2O88811 523 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Smad1P70340 465 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 DselQ0VBN2 1207 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 ADGRF3Q58Y75 991 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Elavl4Q61701 385 aaKnown RBP22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Ptk6Q64434 451 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Acap2Q6ZQK5 770 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr765Q7TRI6 309 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr366Q7TRY4 309 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr293Q7TS10 336 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Dennd1cQ8CFK6 786 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr767Q8VG33 309 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 GcshQ91WK5 170 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Sf3a3Q9D554 501 aaKnown RBP22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Ndst3Q9EQH7 873 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 RalbQ9JIW9 206 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Akr1c12Q9JLI0 323 aa22.59■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Nlrp1bA1Z198 1177 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Cylc2B1AWN8 422 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 P01740 135 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 IghgP01863 330 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 SpnP15702 395 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 F3P20352 294 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Klf1P46099 358 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Rpl26P61255 145 aaKnown RBP22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Ccdc127Q3TC33 260 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Ppp1r13lQ5I1X5 824 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Nlrp9cQ66X01 1004 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Orai3Q6P8G8 290 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Mvb12aQ78HU3 271 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Thoc1Q8R3N6 657 aaKnown RBP22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 VitQ8VHI5 650 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 PinlypQ9CQD7 212 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Rgs10Q9CQE5 181 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Nsmce1Q9D720 266 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Csnk1dQ9DC28 415 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Adam21Q9JI76 729 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Cyb561d2Q9WUE3 222 aa22.58■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Vmn2r74E9PW21 853 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 HdcP23738 662 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Igfbp2P47877 305 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 GckP52792 465 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Sec31bQ3TZ89 1158 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Cdkl4Q3TZA2 342 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Trcg1Q58Y74 825 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Chi3l1Q61362 389 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Tmcc1Q69ZZ6 649 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Fam167aQ6P1G6 215 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Dclk2Q6PGN3 756 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Hdac7Q8C2B3 938 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Eva1bQ8K2Y3 164 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 HnrnplQ8R081 586 aaKnown RBP22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Rpp25Q91WE3 199 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Sult5a1Q91X36 291 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 HnrnpllQ921F4 591 aaKnown RBP22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Dtwd1Q9D8U7 304 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 1700069L16RikQ9D9H5 109 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 AvenQ9D9K3 342 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Rsc1a1Q9ER99 582 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Ccr10Q9JL21 362 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 RecqlQ9Z129 648 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Stk25Q9Z2W1 426 aa22.57■■□□□ 1.2
Scn1b-201ENSMUST00000098548 MntO08789 591 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Gabrb3P63080 473 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 1810049J17RikQ3V2G9 153 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Pde1aQ61481 565 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 MelkQ61846 643 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 PigaQ64323 485 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Hbs1lQ69ZS7 682 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Taf1cQ6PDZ2 836 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Wfikkn2Q7TQN3 571 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Lrrc27Q80YS5 523 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Zbtb42Q811H0 420 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Ppp1r12bQ8BG95 976 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Morc4Q8BMD7 928 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Arhgap29Q8CGF1 1266 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 DcxrQ91X52 244 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Tspan1Q99J59 240 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Plpp3Q99JY8 312 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 LipfQ9CPP7 395 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Nsmce3Q9CPR8 279 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Cacna1dQ99246 2179 aa22.56■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Klhl41A2AUC9 606 aa22.55■■□□□ 1.2
Scn1b-201ENSMUST00000098548 CatsperbA2RTF1 1109 aa22.55■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Gm4847G3X946 537 aa22.55■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Opn1mwO35599 359 aa22.55■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Grk4O70291 574 aa22.55■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Mcpt1P11034 246 aa22.55■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms