RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Zscan4bE9Q3G0 505 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Hsf2P38533 535 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Serpina3fQ80X76 445 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Sema3dQ8BH34 777 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Qsox1Q8BND5 748 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Tceal3Q8R0A5 200 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Grhl1Q921D9 618 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Actrt2Q9D9L5 377 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Jph1Q9ET80 660 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm6509A0A0J9YUV1 481 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ccdc149F6V035 524 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Zc3h12bG3X9I7 835 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm6351K9J7D1 481 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Kcnn4O89109 425 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Mpp1P70290 466 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Dnaaf3Q3UYV8 586 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Snap91Q61548 901 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gba2Q69ZF3 918 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Nudt4Q8R2U6 179 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Chil5A0A0G2JDS2 431 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm7682A0A0J9YUM1 481 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm5485A0A1D5RM98 91 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 MipepA6H611 711 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Cd4P06332 457 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm5800Q497L3 186 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Zdhhc20Q5Y5T1 380 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Mef2dQ63943 514 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Svs6Q64356 99 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ccdc184Q8BMK5 191 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Tmem17Q8K0U3 198 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Olfr532Q8VGT4 309 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Q99KU6 348 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Tlr4Q9QUK6 835 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ptrhd1D3Z4S3 140 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Vmn2r57L7N269 863 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Cbfa2t3O54972 620 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 OmpQ64288 163 aa23.07■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Zfp952B0V2W4 504 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Otud3B1AZ99 396 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Znf382B2RXC5 579 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ifi203O35368 408 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Dnase1l3O55070 310 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Sytl5Q80T23 753 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Fnip2Q80TD3 1108 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gjd3Q91YD1 278 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gpr149Q3UVY1 732 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Kxd1Q80XH1 177 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Fignl1Q8BPY9 683 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Nphs2Q91X05 385 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Clk4O35493 481 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Pik3cdO35904 1043 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Npr3P70180 536 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ahsa2Q8N9S3 331 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Dppa5aQ9CQS7 118 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 CltcQ68FD5 1675 aaKnown RBP23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Vmn2r118E9Q1C1 853 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Fam71e2L7N480 754 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Kng1O08677 661 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 PitpnaP53810 271 aaKnown RBP23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ubtfl1Q3USZ2 394 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 FaddQ61160 205 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Pum1Q80U78 1189 aaKnown RBP23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Sult5a1Q91X36 291 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 EcdQ9CS74 641 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Tinf2Q9QXG9 341 aa23.06■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 DctP29812 517 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Psme2P97372 239 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Bcl2a1Q07440 172 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 MpstQ99J99 297 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Mrpl45Q9D0Q7 306 aaKnown RBP23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Bcl2l12Q9D3J3 255 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 MsraQ9D6Y7 233 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 IgtpQ9DCE9 423 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Gm6685D3YYP3 228 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 S100a2J3QMC7 104 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Has3O08650 554 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 LdlrP35951 862 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Sema4aQ62178 760 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Slc9a4Q8BUE1 797 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ipo13Q8K0C1 963 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Serpinb1bQ8VHP7 382 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 PdgfdQ925I7 370 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Capn15Q9JLG8 1095 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ect2lA0A140LIP2 953 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Slfn9B1ARD6 910 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Scn2bQ56A07 215 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 HrQ61645 1182 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Kctd15Q8K0E1 283 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Hsd3b7Q9EQC1 369 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 PolhQ9JJN0 694 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Myo5cE9Q1F5 1742 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Zfp938E9Q9G3 579 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Ap2a1P17426 977 aaKnown RBP23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Asgr1P34927 284 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Stat5aP42230 793 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Rfx2P48379 717 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Slc30a1Q60738 503 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Lrrc27Q80YS5 523 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Q810M1 233 aa23.05■■□□□ 1.28
Sh3rf1-201ENSMUST00000034060 Zswim3Q8CFL8 695 aa23.05■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms