RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Fthl17aQ9DAX0 182 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Hipk3Q9ERH7 1192 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Homer2Q9QWW1 354 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Morf4l2Q9R0Q4 288 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gpaa1Q9WTK3 621 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Mtmr2Q9Z2D1 643 aa11.48□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ino80eA0A0U1RP99 260 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Slfn3A0A1L1STQ7 640 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Klhdc7aA2APT9 773 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Skint9A7TZG3 319 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gm597E9Q8J5 896 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 H2-Q1O19441 368 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 CrcpO35427 148 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Bnip3O55003 187 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Yme1l1O88967 715 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 H2-Q7P14429 334 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 H2-Q8P14430 326 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gria1P23818 907 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 PdgfraP26618 1089 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Cd40lgP27548 260 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Nos2P29477 1144 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 TktP40142 623 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Rpl6P47911 296 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 H2-Q6P79568 326 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Nkx2-3P97334 362 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Thumpd3P97770 505 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Zfp39Q02525 718 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Crtc2Q3U182 692 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Plk5Q4FZD7 595 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ei24Q61070 340 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Hyal5Q812F3 526 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gpr171Q8BG55 319 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Comtd1Q8BIG7 262 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Enpp4Q8BTJ4 456 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 PxkQ8BX57 582 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Hdac11Q91WA3 347 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 NrarpQ91ZA8 114 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Mrps18bQ99N84 254 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 TbcbQ9D1E6 244 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Rnf6Q9DBU5 667 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gmeb1Q9JL60 562 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Cyb561d2Q9WUE3 222 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Col5a2Q3U962 1497 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Otud4B2RRE7 1107 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ptrhd1D3Z4S3 140 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Vmn2r15L7N2A0 855 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Vmn2r44L7N2E1 861 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 H2-D1P14427 368 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 SiaeP70665 541 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Lypla1P97823 230 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Fam83bQ0VBM2 1012 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Cpne7Q0VE82 557 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Rnf113a2Q14B01 337 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gpat2Q14DK4 801 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Klhl21Q3U410 597 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Psg29Q3URN6 468 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Znf496Q5SXI5 585 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Snx6Q6P8X1 406 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Dennd5aQ6PAL8 1287 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Rps9Q6ZWN5 194 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ankrd46Q8BTZ5 228 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Galnt6Q8C7U7 622 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Pdik1lQ8QZR7 341 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Uhrf1Q8VDF2 782 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Snx29Q9D3S3 818 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Pop7Q9DCH2 140 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Psmg1Q9JK23 289 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ninj2Q9JL89 143 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Slc22a3Q9WTW5 551 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gdf2Q9WV56 428 aa11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Fads2Q9Z0R9 444 aaKnown RBP11.47□□□□□ -0.57
Trim55-201ENSMUST00000029139 Simc1E9Q6E9 1354 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Chil5A0A0G2JDS2 431 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Kcnh4A2A5F7 1018 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Skint11A7XV14 364 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Znf518bB2RRE4 1077 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Sema4dO09126 861 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Stra6O70491 670 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Fli1P26323 452 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 CcnfP51944 777 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ntsr2P70310 416 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Nos3P70313 1202 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 4930502E18RikQ14BQ3 236 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Teddm2Q208S0 260 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gm1587Q3UT80 123 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Armc5Q5EBP3 926 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Traf3Q60803 567 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 NarflQ7TMW6 476 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Zik1Q80YP6 463 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 1700001J03RikQ80ZR8 219 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Aste1Q8BIR2 672 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Mtrf1lQ8BJU9 373 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Ncs1Q8BNY6 190 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Epc2Q8C0I4 808 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 0610009B22RikQ8R3W2 140 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Olfr820Q8VFU5 312 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Pex16Q91XC9 336 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Adgre4Q91ZE5 689 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 PglsQ9CQ60 257 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Pop4Q9CR08 221 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms