RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 KBTBD6Q86V97 674 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 LONP2Q86WA8 852 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 ZC3HC1Q86WB0 502 aaKnown RBP10.26□□□□□ -0.77
PHGDH-224ENST00000641711 CRLF3Q8IUI8 442 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 MAML2Q8IZL2 1156 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-224ENST00000641711 ZBTB44Q8NCP5 570 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 OR2AP1Q8NGE2 309 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 INPP5DQ92835 1189 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 SKA1Q96BD8 255 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 KLHL29Q96CT2 875 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 THOC1Q96FV9 657 aaKnown RBP10.26□□□□□ -0.77
PHGDH-224ENST00000641711 VPS39Q96JC1 886 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 RPL10LQ96L21 214 aaKnown RBP10.26□□□□□ -0.77
PHGDH-224ENST00000641711 PSKH2Q96QS6 385 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 MECRQ9BV79 373 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 FSD1LQ9BXM9 530 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 LRMDAQ9H2I8 198 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 PRSS16Q9NQE7 514 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 IARS2Q9NSE4 1012 aaKnown RBP10.26□□□□□ -0.77
PHGDH-224ENST00000641711 KLC4Q9NSK0 619 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 ZSCAN32Q9NX65 697 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 COPG2Q9UBF2 871 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 SEPT3Q9UH03 358 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 SLCO3A1Q9UIG8 710 aa10.26□□□□□ -0.77
PHGDH-224ENST00000641711 A0A096LPK6 155 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 LOC285095A0A1B0GVY8 99 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 HEATR9A2RTY3 570 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TTC34A8MYJ7 566 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CD160O95971 181 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TOP3BO95985 862 aaKnown RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 C2P06681 752 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 APOA4P06727 396 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 MMP2P08253 660 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 SP9P0CG40 484 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 T-ENOLP0DO92 83 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 FGF3P11487 239 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 COL6A2P12110 1019 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 GABRG2P18507 467 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 COL9A1P20849 921 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CES1P23141 567 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 GLDCP23378 1020 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 RASSF2P50749 326 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 COPAP53621 1224 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 RHOAP61586 193 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ELF3P78545 371 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 NSUN2Q08J23 767 aaKnown RBP eCLIP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF235Q14590 738 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 POU6F1Q14863 301 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 PCLAFQ15004 111 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CARD16Q5EG05 197 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 PPM1JQ5JR12 505 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 C9orf64Q5T6V5 341 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ESRP1Q6NXG1 681 aaKnown RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 KIAA0408Q6ZU52 694 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 Q6ZVU0 165 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CLNKQ7Z7G1 428 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 C2CD4AQ8NCU7 369 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TMIEQ8NEW7 156 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ARRDC2Q8TBH0 407 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 RDH11Q8TC12 318 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 PEX13Q92968 403 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 PPP1R16AQ96I34 528 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 SPACA7Q96KW9 195 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ZNF778Q96MU6 729 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 HHIPQ96QV1 700 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TUBGCP5Q96RT8 1024 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CINPQ9BW66 212 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TMEM120AQ9BXJ8 343 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 OSBPL1AQ9BXW6 950 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 PCED1AQ9H1Q7 454 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 STN1Q9H668 368 aaKnown RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 NT5MQ9NPB1 228 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 TMEM216Q9P0N5 145 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-224ENST00000641711 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 ZFP69BQ9UJL9 534 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 MID2Q9UJV3 735 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 DCTN4Q9UJW0 460 aa10.25□□□□□ -0.77
PHGDH-224ENST00000641711 A0A0G2JND7 137 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 A0A1W2PQ67 120 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 SLC7A4O43246 635 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 LILRB5O75023 590 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 H2AFYO75367 372 aaKnown RBP10.24□□□□□ -0.77
PHGDH-224ENST00000641711 POP4O95707 220 aaKnown RBP10.24□□□□□ -0.77
PHGDH-224ENST00000641711 MT-CO1P00395 513 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 DNTTP04053 509 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 MYL2P10916 166 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 HLA-EP13747 358 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 CPA3P15088 417 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 NDUFV2P19404 249 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 C5AR1P21730 350 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 GABRB3P28472 473 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 OXTRP30559 389 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 WASP42768 502 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 SUOXP51687 545 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 PRKAA2P54646 552 aa10.24□□□□□ -0.77
PHGDH-224ENST00000641711 AP1S1P61966 158 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms