RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 HAPLN3Q96S86 360 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 SNRNP25Q9BV90 132 aaKnown RBP11.54□□□□□ -0.56
MECP2-226ENST00000640414 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 CARD9Q9H257 536 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 ZDHHC6Q9H6R6 413 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 CASS4Q9NQ75 786 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 TMEM51Q9NW97 253 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 DDX56Q9NY93 547 aaKnown RBP11.54□□□□□ -0.56
MECP2-226ENST00000640414 CDC23Q9UJX2 597 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 PILRAQ9UKJ1 303 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 SNX10Q9Y5X0 201 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 KCNMB2Q9Y691 235 aa11.54□□□□□ -0.56
MECP2-226ENST00000640414 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 CRYBG3Q68DQ2 2970 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 ZNF106Q9H2Y7 1883 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PDE2AO00408 941 aaPredicted RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 CEP104O60308 925 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PAGE1O75459 146 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 TM7SF2O76062 418 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 KRT1P04264 644 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 SERPINH1P50454 418 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 OR1D5P58170 312 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 NFATC4Q14934 902 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 TAZQ16635 292 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 LRRC73Q5JTD7 316 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 BRMS1LQ5PSV4 323 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 C16orf46Q6P387 395 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PYROXD2Q8N2H3 581 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PCDH20Q8N6Y1 951 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 OR7D4Q8NG98 312 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 STARD8Q92502 1023 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 PDXPQ96GD0 296 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 ASPSCR1Q9BZE9 553 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 DHX35Q9H5Z1 703 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 PCDH18Q9HCL0 1135 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.53□□□□□ -0.56
MECP2-226ENST00000640414 SLC39A1Q9NY26 324 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
MECP2-226ENST00000640414 FCF1Q9Y324 198 aaKnown RBP11.53□□□□□ -0.56
MECP2-226ENST00000640414 CHD5Q8TDI0 1954 aa11.52□□□□□ -0.56
MECP2-226ENST00000640414 B4DGG1 531 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 FAM72CH0Y354 149 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 MKRN2OSH3BPM6 223 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 CES2O00748 559 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ZMPSTE24O75844 475 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 PDGFAP04085 211 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ITIH2P19823 946 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 TCN2P20062 427 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 HTR1BP28222 390 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 GRNP28799 593 aaKnown RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 CDKN2BP42772 138 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 AIF1P55008 147 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 CDH6P55285 790 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ARF5P84085 180 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 DPYSL3Q14195 570 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 KRT81Q14533 505 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 PDK2Q15119 407 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 DPYSL2Q16555 572 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 CLPPQ16740 277 aaPredicted RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 EIF2S3LQ2VIR3 472 aaKnown RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 ZNF805Q5CZA5 627 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ARTNQ5T4W7 220 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 FAM72AQ5TYM5 149 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ANKS6Q68DC2 871 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 FAM72DQ6L9T8 149 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 RETSATQ6NUM9 610 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 SPOCD1Q6ZMY3 1216 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 TIPARPQ7Z3E1 657 aaKnown RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 TAF8Q7Z7C8 310 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 FAM72BQ86X60 149 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 NLGN4XQ8N0W4 816 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 NLGN4YQ8NFZ3 816 aaPredicted RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 OR6K2Q8NGY2 324 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 EFHD1Q9BUP0 239 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 C1QTNF7Q9BXJ2 289 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 HEMGNQ9BXL5 484 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 TM6SF2Q9BZW4 377 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 SPRY4Q9C004 299 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 SIK2Q9H0K1 926 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 OCIAD1Q9NX40 245 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 SMARCAL1Q9NZC9 954 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 OR12D3Q9UGF7 316 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
MECP2-226ENST00000640414 KCTD3Q9Y597 815 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 ACTL7AQ9Y615 435 aa11.52□□□□□ -0.57
MECP2-226ENST00000640414 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms