RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 LSSP48449 732 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 CCL7P80098 99 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 CTBSQ01459 385 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 CDK18Q07002 472 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SLC14A2Q15849 920 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 CERCAMQ5T4B2 595 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SLC30A9Q6PML9 568 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 LRRC69Q6ZNQ3 347 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 LSMEM2Q8N112 164 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 Q8N9G6 341 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 ACRBPQ8NEB7 543 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SNIP1Q8TAD8 396 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 ZDHHC1Q8WTX9 485 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 GRAMD1AQ96CP6 724 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 TEKT5Q96M29 485 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 HEMGNQ9BXL5 484 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 FAM83DQ9H4H8 585 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 ZFYVE1Q9HBF4 777 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 TAAR2Q9P1P5 351 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 KLHL8Q9P2G9 620 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 LRIT1Q9P2V4 623 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SATB2Q9UPW6 733 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SHOC2Q9UQ13 582 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 RNF215Q9Y6U7 377 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 RRP8O43159 456 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 EIF2S3P41091 472 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 ABCG1P45844 678 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 PDX1P52945 283 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 MAZP56270 477 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 WASHC5Q12768 1159 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 PPP2R5EQ16537 467 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 CCDC181Q5TID7 509 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 CCDC70Q6NSX1 233 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 TADA1Q96BN2 335 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 COX14Q96I36 57 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 CALR3Q96L12 384 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 WDR24Q96S15 920 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 APPL1Q9UKG1 709 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
CACNA1A-259ENST00000638114 A0A1W2PQM1 296 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 RGSL1A5PLK6 1076 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 BTNL10A8MVZ5 291 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 FADS2P1A8MWK0 482 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 D6RAR5 112 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 F5H423 210 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 NDST3O95803 873 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 FGF1P05230 155 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 PNLIPP16233 465 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 NFKB1P19838 968 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 CD68P34810 354 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 CTNNA1P35221 906 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ACTR1BP42025 376 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 VAV2P52735 878 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ACTR1AP61163 376 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 BIRC2Q13490 618 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 PEX6Q13608 980 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 PYCR3Q53H96 274 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ALS2CLQ60I27 953 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 FOXR1Q6PIV2 292 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 BBS12Q6ZW61 710 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 GALNT13Q8IUC8 556 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF578Q96N58 590 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 QKIQ96PU8 341 aaKnown RBP eCLIP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 GPR63Q9BZJ6 419 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 MAGEE1Q9HCI5 957 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 EPB41L5Q9HCM4 733 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 PLEKHM1Q9Y4G2 1056 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 PCDHA3Q9Y5H8 950 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 ST14Q9Y5Y6 855 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 KIF26BQ2KJY2 2108 aa16.64■□□□□ 0.25
CACNA1A-259ENST00000638114 NBEAQ8NFP9 2946 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 CCDC187A0A096LP49 1063 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 A0A1W2PNU3 283 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 MACROD2A1Z1Q3 448 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 RHPN2P1A8MT19 583 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 HACD1B0YJ81 288 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 APOC4-APOC2K7ER74 178 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 NUDT21O43809 227 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 DXOO77932 396 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 ECEL1O95672 775 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 APOC2P02655 101 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 ITPKBP27987 946 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 RBMS1P29558 406 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 COPS2P61201 443 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 CCDC173Q0VFZ6 552 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 PID1Q7Z2X4 250 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms