RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TMEM98Q9Y2Y6 226 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 WASH4PA8MWX3 477 aa18■□□□□ 0.47
CLN6-212ENST00000636020 SMC2O95347 1197 aa18■□□□□ 0.47
CLN6-212ENST00000636020 C9P02748 559 aa18■□□□□ 0.47
CLN6-212ENST00000636020 MT-ND3P03897 115 aa18■□□□□ 0.47
CLN6-212ENST00000636020 FGF5P12034 268 aa18■□□□□ 0.47
CLN6-212ENST00000636020 ETV3P41162 512 aa18■□□□□ 0.47
CLN6-212ENST00000636020 GFERP55789 205 aa18■□□□□ 0.47
CLN6-212ENST00000636020 LRP8Q14114 963 aa18■□□□□ 0.47
CLN6-212ENST00000636020 SP5Q6BEB4 398 aaPredicted RBP18■□□□□ 0.47
CLN6-212ENST00000636020 RAET1GQ6H3X3 334 aa18■□□□□ 0.47
CLN6-212ENST00000636020 IYDQ6PHW0 289 aa18■□□□□ 0.47
CLN6-212ENST00000636020 PYROXD2Q8N2H3 581 aa18■□□□□ 0.47
CLN6-212ENST00000636020 PAF1Q8N7H5 531 aa18■□□□□ 0.47
CLN6-212ENST00000636020 SMARCE1Q969G3 411 aa18■□□□□ 0.47
CLN6-212ENST00000636020 ELMO2Q96JJ3 720 aa18■□□□□ 0.47
CLN6-212ENST00000636020 NSMCE3Q96MG7 304 aa18■□□□□ 0.47
CLN6-212ENST00000636020 TBC1D10AQ9BXI6 508 aa18■□□□□ 0.47
CLN6-212ENST00000636020 GPR87Q9BY21 358 aa18■□□□□ 0.47
CLN6-212ENST00000636020 BRD8Q9H0E9 1235 aa18■□□□□ 0.47
CLN6-212ENST00000636020 PDCL3Q9H2J4 239 aa18■□□□□ 0.47
CLN6-212ENST00000636020 PHTF1Q9UMS5 762 aa18■□□□□ 0.47
CLN6-212ENST00000636020 CCDC168Q8NDH2 2452 aa18■□□□□ 0.47
CLN6-212ENST00000636020 TACC2O95359 2948 aa18■□□□□ 0.47
CLN6-212ENST00000636020 PRAMEF11O60813 436 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 HEXIM1O94992 359 aaKnown RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 PNMA6AP0CW24 399 aaPredicted RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 RPS18P62269 152 aaKnown RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 KRT85P78386 507 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLN6-212ENST00000636020 DENND2CQ68D51 928 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 KLHL10Q6JEL2 608 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 Q6ZVL8 140 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 STRADAQ7RTN6 431 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 HSD11B1LQ7Z5J1 315 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 RHOT1Q8IXI2 618 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 RXFP2Q8WXD0 754 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 NTAN1Q96AB6 310 aa17.99■□□□□ 0.47
CLN6-212ENST00000636020 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 STN1Q9H668 368 aaKnown RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 METTL5Q9NRN9 209 aaKnown RBP17.99■□□□□ 0.47
CLN6-212ENST00000636020 GOLGA6CA6NDK9 693 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 GOLGA6BA6NDN3 693 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 TOX3O15405 576 aaPredicted RBP17.98■□□□□ 0.47
CLN6-212ENST00000636020 GOLGA6DP0CG33 693 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 PTPN4P29074 926 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 VIPR1P32241 457 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 SEPHS1P49903 392 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 ITGA1P56199 1179 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 HDAC4P56524 1084 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 BPIFB4P59827 614 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 IL10RAQ13651 578 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 LAMB3Q13751 1172 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 ISM2Q6H9L7 571 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 MARK2Q7KZI7 788 aaKnown RBP17.98■□□□□ 0.47
CLN6-212ENST00000636020 SYVN1Q86TM6 617 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 SLC9B2Q86UD5 537 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 FAM71AQ8IYT1 594 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 FDCSPQ8NFU4 85 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 GPT2Q8TD30 523 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 NELFBQ8WX92 580 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 SPOCK2Q92563 424 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 CENPIQ92674 756 aaPredicted RBP17.98■□□□□ 0.47
CLN6-212ENST00000636020 NUDT9Q9BW91 350 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 LRRC19Q9H756 370 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 AKIRIN1Q9H9L7 192 aaPredicted RBP17.98■□□□□ 0.47
CLN6-212ENST00000636020 GOLGA6AQ9NYA3 693 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 TBC1D29Q9UFV1 150 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 DCHS2Q6V1P9 2916 aa17.98■□□□□ 0.47
CLN6-212ENST00000636020 PCNX1Q96RV3 2341 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 SOD1P00441 154 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 PON1P27169 355 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 SDC4P31431 198 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 PPP1R2P41236 205 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 PTGIRP43119 386 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 DPTQ07507 201 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 NSUN2Q08J23 767 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN6-212ENST00000636020 ZXDCQ2QGD7 858 aaPredicted RBP17.97■□□□□ 0.47
CLN6-212ENST00000636020 PLEKHN1Q494U1 663 aaPredicted RBP17.97■□□□□ 0.47
CLN6-212ENST00000636020 ADAMTSL4Q6UY14 1074 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 GBP6Q6ZN66 633 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 GALNT13Q8IUC8 556 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 FMR1NBQ8N0W7 255 aaPredicted RBP17.97■□□□□ 0.47
CLN6-212ENST00000636020 CISD2Q8N5K1 135 aaKnown RBP17.97■□□□□ 0.47
CLN6-212ENST00000636020 FNIP1Q8TF40 1166 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 OGFRQ9NZT2 677 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 CNOT8Q9UFF9 292 aaKnown RBP17.97■□□□□ 0.47
CLN6-212ENST00000636020 DNAJC12Q9UKB3 198 aa17.97■□□□□ 0.47
CLN6-212ENST00000636020 BICDL2A1A5D9 508 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 LILRA5A6NI73 299 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 C2CD4BA6NLJ0 364 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PPP1R3GB7ZBB8 358 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PALMO75781 387 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 TIAF1O95411 115 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PTPN9P43378 593 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 GPR1P46091 355 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 ELOAQ14241 798 aaKnown RBP17.96■□□□□ 0.47
CLN6-212ENST00000636020 EXOC3L4Q17RC7 722 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 FAM199XQ6PEV8 388 aaPredicted RBP17.96■□□□□ 0.47
CLN6-212ENST00000636020 SLFN11Q7Z7L1 901 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms