RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CXCL14O95715 111 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CLTAP09496 248 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FTH1P19P0C7X4 201 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PRR23D2P0DMB1 279 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 IFNGR1P15260 489 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ITIH1P19827 911 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SDHAP31040 664 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SOAT1P35610 550 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ATP5C1P36542 298 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ENTPD1P49961 510 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RNF4P78317 190 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DRP2Q13474 957 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SLBPQ14493 270 aaKnown RBP eCLIP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NONOQ15233 471 aaKnown RBP eCLIP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PCSK7Q16549 785 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KLHL40Q2TBA0 621 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 MPPE1Q53F39 396 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SLC44A4Q53GD3 710 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FBLN7Q53RD9 439 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DCST1Q5T197 706 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM182BQ5T319 152 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 UBAP2Q5T6F2 1119 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NAIF1Q69YI7 327 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CDC73Q6P1J9 531 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PMF1Q6P1K2 205 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TRMT10CQ7L0Y3 403 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TAS1R1Q7RTX1 841 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KIAA1328Q86T90 577 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM228AQ86W67 206 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RASGRP3Q8IV61 690 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 LKAAEAR1Q8TD35 194 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 GATA6Q92908 595 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 GRAMD1AQ96CP6 724 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DTD2Q96FN9 168 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NSMCE2Q96MF7 247 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM20AQ96MK3 541 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CDT1Q9H211 546 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 C12orf65Q9H3J6 166 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PCDH9Q9HC56 1237 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 MRPL47Q9HD33 250 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DDX28Q9NUL7 540 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FBXO28Q9NVF7 368 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 HCN3Q9P1Z3 774 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CRNNQ9UBG3 495 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TRIM10Q9UDY6 481 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CDH22Q9UJ99 828 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 GGA1Q9UJY5 639 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM59LQ9UK28 342 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 HBS1LQ9Y450 684 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 UBE4BO95155 1302 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CROCC2H7BZ55 1655 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TRBV2A0A0J9YWF9 115 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 C1orf232A0A0U1RR37 186 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 SH3D21A4FU49 640 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 GABRR3A8MPY1 467 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 FAM171A2A8MVW0 826 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 PSMD11O00231 422 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 QSOX1O00391 747 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 PIK3R2O00459 728 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 HGSO14964 777 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-213ENST00000630925 XPO1O14980 1071 aaKnown RBP4.86□□□□□ -1.63
SDCBP-213ENST00000630925 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 ARHGEF9O43307 516 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 LANCL1O43813 399 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TBX19O60806 448 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 RPP40O75818 363 aaKnown RBP4.86□□□□□ -1.63
SDCBP-213ENST00000630925 MYO1DO94832 1006 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 LCATP04180 440 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 SERPING1P05155 500 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 IGFBP1P08833 259 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-213ENST00000630925 DRD5P21918 477 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TUBG1P23258 451 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 PRKCHP24723 683 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 MSX1P28360 303 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 ARL1P40616 181 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-213ENST00000630925 PSMD7P51665 324 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 AIF1P55008 147 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 OXCT1P55809 520 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TGM3Q08188 693 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 RASGEF1BQ0VAM2 473 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 GRIK3Q13003 919 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 UGP2Q16851 508 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM119Q4V9L6 283 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 KLHL26Q53HC5 615 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 MFSD14BQ5SR56 506 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 VWA5B1Q5TIE3 1220 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 PRAMEF13Q5VWM6 474 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 FOXR2Q6PJQ5 311 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 SERPINA13PQ6UXR4 307 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 SCARA5Q6ZMJ2 495 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 TMC3Q7Z5M5 1100 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 ADAMTSL2Q86TH1 951 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 IQCHQ86VS3 1027 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 MAPKAPK5Q8IW41 473 aa4.86□□□□□ -1.63
SDCBP-213ENST00000630925 YAF2Q8IY57 180 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms