RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PIGKQ92643 395 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 HIST1H2AAQ96QV6 131 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 PAK6Q9NQU5 681 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 RDH8Q9NYR8 311 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 IL12BP29460 328 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 RPL38P63173 70 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZNF567Q8N184 647 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 PGM2Q96G03 612 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 ABCG4Q9H172 646 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 HEBP2Q9Y5Z4 205 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 MATN4O95460 622 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 DET1Q7L5Y6 550 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 OSMRQ99650 979 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 RTKNQ9BST9 563 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 PCDHGB1Q9Y5G3 927 aa13.16□□□□□ -0.3
SYNGAP1-208ENST00000629380 DISP2A7MBM2 1401 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 SH3BGRLO75368 114 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 MAPK14Q16539 360 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 PRR23BQ6ZRT6 265 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 NXF3Q9H4D5 531 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 A0A087X0B3 334 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 PGM5Q15124 567 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 LRRC70Q7Z2Q7 622 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 SYVN1Q86TM6 617 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 AIF1LQ9BQI0 150 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZDHHC4Q9NPG8 344 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 FFAR3O14843 346 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 GPR42O15529 346 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 MTHFD1P11586 935 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 RFX5P48382 616 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 CAPN13Q6MZZ7 669 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 CXorf57Q6NSI4 855 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 HM13Q8TCT9 377 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 SCGB3A2Q96PL1 93 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 EBNA1BP2Q99848 306 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 FBXO9Q9UK97 447 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 PCBD2Q9H0N5 130 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 C2CD2Q9Y426 696 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 FRRS1Q6ZNA5 592 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 NKIRAS2Q9NYR9 191 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 TRIM38O00635 465 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 SCN2BO60939 215 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 ASB8Q9H765 288 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 CDH8P55286 799 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 C15orf40Q8WUR7 153 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 WNT8BQ93098 351 aa13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-208ENST00000629380 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 SRRM3A6NNA2 597 aaPredicted RBP13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 TSPAN3O60637 253 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 NTRK1P04629 796 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 FAM153BP0C7A2 387 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 UROSP10746 265 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 RNF43Q68DV7 783 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 AENQ8WTP8 325 aaKnown RBP13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 TKTL2Q9H0I9 626 aa13.15□□□□□ -0.31
SYNGAP1-208ENST00000629380 PLOD2O00469 737 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 RFXANKO14593 260 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 KAT7O95251 611 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DDX6P26196 483 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CTSKP43235 329 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ACAP2Q15057 778 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 MKLN1Q9UL63 735 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 CD2P06729 351 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 LPOP22079 712 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZPBP2Q6X784 338 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 OR8D1Q8WZ84 308 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZYG11BQ9C0D3 744 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPATCH2LQ9NWQ4 482 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 PSMB4P28070 264 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ELP6Q0PNE2 266 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNGAP1-208ENST00000629380 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms