RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 MKS1Q9NXB0 559 aa10.11□□□□□ -0.79
FOXCUT-201ENST00000628509 FAM53CQ9NYF3 392 aa10.11□□□□□ -0.79
FOXCUT-201ENST00000628509 FKBPLQ9UIM3 349 aa10.11□□□□□ -0.79
FOXCUT-201ENST00000628509 SPO11Q9Y5K1 396 aa10.11□□□□□ -0.79
FOXCUT-201ENST00000628509 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
FOXCUT-201ENST00000628509 COL4A3Q01955 1670 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 FAM95CA0A1B0GW59 222 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 KANSL1LA0AUZ9 987 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 UBA6A0AVT1 1052 aaPredicted RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 KLHL33A6NCF5 533 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 PABPN1LA6NDY0 278 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 LRRC72A6NJI9 287 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 STK25O00506 426 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 PRMT5O14744 637 aaPredicted RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ZNF217O75362 1048 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 RNASEH2AO75792 299 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 TM7SF2O76062 418 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 AP2A2O94973 939 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CTSLP07711 333 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 OR56A5P0C7T3 313 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 NEFHP12036 1026 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CD9P21926 228 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 OXTRP30559 389 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 NSG1P42857 185 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 MAPK9P45984 424 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CCR3P51677 355 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 STARD6P59095 220 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 RAB10P61026 200 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 RPS21P63220 83 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 GTF2H3Q13889 308 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CCINQ13939 588 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 EFTUD2Q15029 972 aaKnown RBP eCLIP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 FAM83EQ2M2I3 478 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 TTLL9Q3SXZ7 439 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CCDC153Q494R4 210 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 TTMPQ5BVD1 217 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 EMC10Q5UCC4 262 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 AGAP9Q5VTM2 703 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 HHATQ5VTY9 493 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 PTRHD1Q6GMV3 140 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 KYAT3Q6YP21 454 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SYT13Q7L8C5 426 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 EXOC3L1Q86VI1 746 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ZNF366Q8N895 744 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 GPATCH11Q8N954 259 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 RPLP0P6Q8NHW5 317 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ARL8AQ96BM9 186 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 NUS1Q96E22 293 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 APOPT1Q96IL0 206 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ELMO2Q96JJ3 720 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ZNF514Q96K75 400 aaPredicted RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ZNF778Q96MU6 729 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SPATA16Q9BXB7 569 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SGK2Q9HBY8 427 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 INTS9Q9NV88 658 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SMOXQ9NWM0 555 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 FBXL12Q9NXK8 326 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 EURLQ9NYK6 297 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SLC2A6Q9UGQ3 507 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 SLC39A10Q9ULF5 831 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 ACOT9Q9Y305 439 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 VWA7Q9Y334 891 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 TRANK1O15050 2925 aa10.1□□□□□ -0.79
FOXCUT-201ENST00000628509 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 GPR89AB7ZAQ6 455 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 TOR1BO14657 336 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 AREL1O15033 823 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 MAGEC1O60732 1142 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 PCDH8O95206 1070 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 AHSGP02765 367 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 PRKCGP05129 697 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 GPR89BP0CG08 455 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 BPIP17213 487 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 MSH3P20585 1137 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 RPS3P23396 243 aaKnown RBP eCLIP10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 ARNTP27540 789 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 GCAP28676 217 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 FOXN2P32314 431 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 P2RY2P41231 377 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 RGS4P49798 205 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 PRKAA2P54646 552 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 NAA20P61599 178 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 RPS14P62263 151 aaKnown RBP10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 PTSQ03393 145 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 DPTQ07507 201 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 CTBP1Q13363 440 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 IHHQ14623 411 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 UBXN2BQ14CS0 331 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 FAM182AQ5T1J6 154 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 TXNDC11Q6PKC3 985 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 FAM151BQ6UXP7 276 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 LIPIQ6XZB0 460 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
FOXCUT-201ENST00000628509 PHYKPLQ8IUZ5 450 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms