RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CENPTQ96BT3 561 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 AP2M1Q96CW1 435 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 ELF4Q99607 663 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 KLF6Q99612 283 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 ERP44Q9BS26 406 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 CARD6Q9BX69 1037 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 RAB17Q9H0T7 212 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 ERVMER34-1Q9H9K5 563 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 XAB2Q9HCS7 855 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 MBNL1Q9NR56 388 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 TOR4AQ9NXH8 423 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 CD84Q9UIB8 345 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 ANGPTL2Q9UKU9 493 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 UTP11Q9Y3A2 253 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 HS3ST3A1Q9Y663 406 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 FREM2Q5SZK8 3169 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 ZZEF1O43149 2961 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 GOLGA8MH3BSY2 632 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 BUD23O43709 281 aaKnown RBP14.65□□□□□ -0.06
PNKP-221ENST00000627317 DFNA5O60443 496 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 MAGEC1O60732 1142 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 DKK1O94907 266 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 TOP3BO95985 862 aaKnown RBP14.65□□□□□ -0.06
PNKP-221ENST00000627317 MTM1Q13496 603 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 LAMB3Q13751 1172 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 TRIP6Q15654 476 aaKnown RBP14.65□□□□□ -0.06
PNKP-221ENST00000627317 CERCAMQ5T4B2 595 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 RAET1GQ6H3X3 334 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 ESRP1Q6NXG1 681 aaKnown RBP14.65□□□□□ -0.06
PNKP-221ENST00000627317 LRRC8BQ6P9F7 803 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 KANSL1Q7Z3B3 1105 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 ABI3BPQ7Z7G0 1075 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 HOOK3Q86VS8 718 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 MMGT1Q8N4V1 131 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 NAT8LQ8N9F0 302 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 MCUQ8NE86 351 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 PPHLN1Q8NEY8 458 aaKnown RBP14.65□□□□□ -0.06
PNKP-221ENST00000627317 FAM174AQ8TBP5 190 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 EID2BQ96D98 161 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 CDH19Q9H159 772 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 ABCG8Q9H221 673 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 DPH5Q9H2P9 285 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 FAM83DQ9H4H8 585 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 BPIFA1Q9NP55 256 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 BFARQ9NZS9 450 aa14.65□□□□□ -0.06
PNKP-221ENST00000627317 HEATR9A2RTY3 570 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 POM121BA6NF01 834 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SMAPO00193 183 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SEC31AO94979 1220 aaKnown RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 PYGLP06737 847 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 TSHRP16473 764 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 BPIP17213 487 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 IVDP26440 423 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SPAM1P38567 509 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 GPR1P46091 355 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 RPL21P46778 160 aaKnown RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 RABIFP47224 123 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 RXRGP48443 463 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 ZNF140P52738 457 aaPredicted RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 DCDC1P59894 354 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 IL9RQ01113 521 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 DPTQ07507 201 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 CALCOCO2Q13137 446 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 INPP5AQ14642 412 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 MORF4L2Q15014 288 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 CCDC38Q502W7 563 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 ZDHHC20Q5W0Z9 365 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 ZNF534Q76KX8 674 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 NOA1Q8NC60 698 aaKnown RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 PLA2G15Q8NCC3 412 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 BBOF1Q8ND07 529 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 OR13H1Q8NG92 308 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 OR4K2Q8NGD2 314 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SAP25Q8TEE9 199 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SCAMP4Q969E2 229 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 KLHDC7BQ96G42 594 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 CNTNAP3BQ96NU0 1288 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SERPINB12Q96P63 405 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 RIOK2Q9BVS4 552 aaKnown RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 SPATA16Q9BXB7 569 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 IL22Q9GZX6 179 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 WDR26Q9H7D7 661 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 GDF3Q9NR23 364 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 IL17CQ9P0M4 197 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 NFKBIL1Q9UBC1 381 aaPredicted RBP14.64□□□□□ -0.07
PNKP-221ENST00000627317 ANAPC5Q9UJX4 755 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SNX24Q9Y343 169 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 MYLKQ15746 1914 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 IGF2RP11717 2491 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 SCN8AQ9UQD0 1980 aa14.64□□□□□ -0.07
PNKP-221ENST00000627317 TMEM131Q92545 1883 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 CCDC78A2IDD5 438 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 LDB2O43679 373 aa14.63□□□□□ -0.07
PNKP-221ENST00000627317 MLNP12872 115 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms