RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ZNF564Q8TBZ8 553 aaPredicted RBP16.39■□□□□ 0.21
TRIM29-221ENST00000627238 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 AP2M1Q96CW1 435 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 LYSMD1Q96S90 227 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 ZPBPQ9BS86 351 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 SUDS3Q9H7L9 328 aaPredicted RBP16.39■□□□□ 0.21
TRIM29-221ENST00000627238 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIM29-221ENST00000627238 SLC39A1Q9NY26 324 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 TMEM9Q9P0T7 183 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 VPS18Q9P253 973 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 AMACRQ9UHK6 382 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 LRRK2Q5S007 2527 aa16.39■□□□□ 0.21
TRIM29-221ENST00000627238 ZNF891A8MT65 544 aaPredicted RBP16.38■□□□□ 0.21
TRIM29-221ENST00000627238 DUX1O43812 170 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 RAD1O60671 282 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 RARAP10276 462 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 TCF4P15884 667 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 CES1P23141 567 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 STC1P52823 247 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 POLE2P56282 527 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 MC2RQ01718 297 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
TRIM29-221ENST00000627238 PTPRRQ15256 657 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 ASIC2Q16515 512 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 SMTNL2Q2TAL5 461 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 SLC37A2Q8TED4 501 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 MAML1Q92585 1016 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 RTP4Q96DX8 246 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 POLR1EQ9GZS1 481 aaKnown RBP16.38■□□□□ 0.21
TRIM29-221ENST00000627238 PCDH18Q9HCL0 1135 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 SARS2Q9NP81 518 aaKnown RBP16.38■□□□□ 0.21
TRIM29-221ENST00000627238 OCIAD1Q9NX40 245 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 PLEKHM1Q9Y4G2 1056 aa16.38■□□□□ 0.21
TRIM29-221ENST00000627238 GOLGA6CA6NDK9 693 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 GOLGA6BA6NDN3 693 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 GOLGA6DP0CG33 693 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 IL4RP24394 825 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 EPHA4P54764 986 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 RPL26P61254 145 aaKnown RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 TLE1Q04724 770 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 SRSF1Q07955 248 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 KCNAB2Q13303 367 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 CRTC2Q53ET0 693 aaPredicted RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 DOK6Q6PKX4 331 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 RFLNAQ6ZTI6 216 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 OR10G6Q8NH81 332 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 JPH3Q8WXH2 748 aaPredicted RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 SCAMP4Q969E2 229 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 BPIFA3Q9BQP9 254 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 EFHD1Q9BUP0 239 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 FBXO8Q9NRD0 319 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 GOLGA6AQ9NYA3 693 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 RPL26L1Q9UNX3 145 aaKnown RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 TMEM98Q9Y2Y6 226 aa16.37■□□□□ 0.21
TRIM29-221ENST00000627238 TMEM184BQ9Y519 407 aaPredicted RBP16.37■□□□□ 0.21
TRIM29-221ENST00000627238 A6NCN8 305 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 EFCAB7A8K855 629 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 DNAJC6O75061 913 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 CTPS1P17812 591 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 MAP4P27816 1152 aaKnown RBP16.36■□□□□ 0.21
TRIM29-221ENST00000627238 MAN1A1P33908 653 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 CCR10P46092 362 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 GALNT2Q10471 571 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 IHHQ14623 411 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 ANKS6Q68DC2 871 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 NLGN4XQ8N0W4 816 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 NLGN4YQ8NFZ3 816 aaPredicted RBP16.36■□□□□ 0.21
TRIM29-221ENST00000627238 HSPH1Q92598 858 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 SH3KBP1Q96B97 665 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 SLC38A3Q99624 504 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 TDRD1Q9BXT4 1180 aaKnown RBP16.36■□□□□ 0.21
TRIM29-221ENST00000627238 EPB41L1Q9H4G0 881 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 RMI1Q9H9A7 625 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 NT5MQ9NPB1 228 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 CD84Q9UIB8 345 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 CNOT6Q9ULM6 557 aaKnown RBP16.36■□□□□ 0.21
TRIM29-221ENST00000627238 NBPF19A0A087WUL8 3843 aa16.36■□□□□ 0.21
TRIM29-221ENST00000627238 MAP3K6O95382 1288 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 EML2O95834 649 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 PRLP01236 227 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 MPSTP25325 297 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 GARSP41250 739 aaKnown RBP16.35■□□□□ 0.21
TRIM29-221ENST00000627238 HHEXQ03014 270 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 ABHD18Q0P651 414 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 MAP7Q14244 749 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 PAFAH1B3Q15102 231 aaKnown RBP16.35■□□□□ 0.21
TRIM29-221ENST00000627238 FIGNQ5HY92 759 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 COLEC12Q5KU26 742 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 HENMT1Q5T8I9 393 aaKnown RBP16.35■□□□□ 0.21
TRIM29-221ENST00000627238 TIGD7Q6NT04 549 aaPredicted RBP16.35■□□□□ 0.21
TRIM29-221ENST00000627238 IYDQ6PHW0 289 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 CEACAM20Q6UY09 585 aa16.35■□□□□ 0.21
TRIM29-221ENST00000627238 TRIM74Q86UV6 250 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms