RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 CDH17Q12864 832 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 STX5Q13190 355 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 PRPSAP1Q14558 356 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 TRIM71Q2Q1W2 868 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CLK4Q9HAZ1 481 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 IPO11Q9UI26 975 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 KCTD3Q9Y597 815 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 PTGDR2Q9Y5Y4 395 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 TRPC5OSA6NMA1 111 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 KDM1AO60341 852 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 ZBTB11O95625 1053 aaPredicted RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CPB1P15086 417 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 SLC1A2P43004 574 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 CSRP3P50461 194 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 SP3Q02447 781 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 NR1D2Q14995 579 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 NHSL2Q5HYW2 709 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 SMOXQ9NWM0 555 aa13.37□□□□□ -0.27
PCDHB17P-202ENST00000623466 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 OR51F1A6NGY5 319 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 NOTOA8MTQ0 251 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HSPA1AP0DMV8 641 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HSPA1BP0DMV9 641 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 ARNTP27540 789 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SLC7A1P30825 629 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 APLP1P51693 650 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 PRSS55Q6UWB4 352 aaPredicted RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 GPR141Q7Z602 305 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SPPL2CQ8IUH8 684 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 OFCC1Q8IZS5 231 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 IGSF8Q969P0 613 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 PSMG2Q969U7 264 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 ISOC1Q96CN7 298 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HHIPL1Q96JK4 782 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SMIM14Q96QK8 99 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 MAGEB16A2A368 324 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SLC4A1P02730 911 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CYP11A1P05108 521 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CHRM3P20309 590 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HCAR3P49019 387 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 HTRA3P83110 453 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 DSC2Q02487 901 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TAF10Q12962 218 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 DUSP4Q13115 394 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SF3B4Q15427 424 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 C10orf120Q5SQS8 335 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TTC33Q6PID6 262 aaPredicted RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TMCO2Q7Z6W1 182 aaPredicted RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CUZD1Q86UP6 607 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 ALDH16A1Q8IZ83 802 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SH3RF2Q8TEC5 729 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CYP2S1Q96SQ9 504 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TBL1YQ9BQ87 522 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 NOL6Q9H6R4 1146 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 FNDC3AQ9Y2H6 1198 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TCRBV3S1A0A5B6 114 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 ATE1O95260 518 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 TM4SF4P48230 202 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CDH13P55290 713 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CAPRIN1Q14444 709 aaKnown RBP13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 DENND5AQ6IQ26 1287 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 XKR5Q6UX68 686 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SLC24A5Q71RS6 500 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 RNF180Q86T96 592 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 C11orf74Q86VG3 221 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 EXT2Q93063 718 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 SCLYQ96I15 445 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CCSER2Q9H7U1 834 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 CD300AQ9UGN4 299 aa13.36□□□□□ -0.27
PCDHB17P-202ENST00000623466 RNF103-CHMP3A0A140T963 221 aa13.35□□□□□ -0.27
PCDHB17P-202ENST00000623466 CCDC162PA2VCL2 907 aa13.35□□□□□ -0.27
PCDHB17P-202ENST00000623466 A6NL46 340 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms