RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 DCUN1D1Q96GG9 259 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 KLHL32Q96NJ5 620 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRAPPC9Q96Q05 1148 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 SEZ6LQ9BYH1 1024 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 COPS7BQ9H9Q2 264 aaPredicted RBP8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 FBRSL1Q9HCM7 1045 aaKnown RBP8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 SPAG4Q9NPE6 437 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRPM5Q9NZQ8 1165 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 RNF112Q9ULX5 631 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 TBC1D30Q9Y2I9 924 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 MED16Q9Y2X0 877 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 RAI2Q9Y5P3 530 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
SND1-IT1-201ENST00000623342 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 LRRC14BA6NHZ5 514 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SUPT3HB4E1H0 165 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PITPNM1O00562 1244 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PPP6CO00743 305 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TXNDC9O14530 226 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PFDN6O15212 129 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 CLASP2O75122 1294 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SUPT3HO75486 399 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 F11P03951 625 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PYGLP06737 847 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ALDOCP09972 364 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 HMGA1P17096 107 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 GPX3P22352 226 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ALDH7A1P49419 539 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRAP1Q12931 704 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PDK3Q15120 406 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ADGRF1Q5T601 910 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 RNF219Q5W0B1 726 aaPredicted RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 FAM219BQ5XKK7 198 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 MFN1Q8IWA4 741 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 FBXO39Q8N4B4 442 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 NKAPQ8N5F7 415 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR9I1Q8NGQ6 314 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PIP4K2CQ8TBX8 421 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 GBP5Q96PP8 586 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 GCNAQ96QF7 691 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ADGRE3Q9BY15 652 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 GKN1Q9NS71 199 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 CROTQ9UKG9 612 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PCDHGC4Q9Y5F7 938 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 OAS3Q9Y6K5 1087 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SYCE1LA8MT33 242 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 BBIP1A8MTZ0 92 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ANKRD66B4E2M5 251 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PIP5K1BO14986 540 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 DENRO43583 198 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TSPAN3O60637 253 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 VPS26AO75436 327 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ECI2O75521 394 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SEC24AO95486 1093 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 EFEMP2O95967 443 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 EEF1DP29692 281 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TTPAP49638 278 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 FOXA1P55317 472 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 NAA20P61599 178 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 CLCQ05315 142 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 LCP2Q13094 533 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PTPRNQ16849 979 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 KIF19Q2TAC6 998 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SAMD4BQ5PRF9 694 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 C8orf82Q6P1X6 216 aaPredicted RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TICAM1Q8IUC6 712 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 FUNDC1Q8IVP5 155 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ST13P4Q8IZP2 240 aaPredicted RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 LILRA2Q8N149 483 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 SNX31Q8N9S9 440 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ROPN1LQ96C74 230 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 NSUN5Q96P11 429 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 GPR21Q99679 349 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PKP2Q99959 881 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZBED2Q9BTP6 218 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 Q9H521 79 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 TMEM181Q9P2C4 612 aa8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 AFF4Q9UHB7 1163 aaKnown RBP8.28□□□□□ -1.08
SND1-IT1-201ENST00000623342 PRORSD1PA6NEY8 169 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 MAP3K13O43283 966 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CAPNS1P04632 268 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 C8BP07358 591 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 IRF1P10914 325 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 PKMP14618 531 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CD9P21926 228 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 MC4RP32245 332 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 ARF5P84085 180 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 GRM2Q14416 872 aa8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TSNQ15631 228 aaKnown RBP8.27□□□□□ -1.09
SND1-IT1-201ENST00000623342 TAF12Q16514 161 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms