RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 BPIFA1Q9NP55 256 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 SIRPGQ9P1W8 387 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 GULP1Q9UBP9 304 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 KLK13Q9UKR3 277 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 CEP295Q9C0D2 2601 aa13.9□□□□□ -0.18
PCDHGC3-208ENST00000622836 CPED1A4D0V7 1026 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 AURKAO14965 403 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 LIASO43766 372 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 IFNB1P01574 187 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 FGGP02679 453 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 CEACAM5P06731 702 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 CXCR5P32302 372 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 POLD2P49005 469 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 GDF10P55107 478 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 ILF3Q12906 894 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 NR0B2Q15466 257 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 PARP6Q2NL67 630 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 P3H1Q32P28 736 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 ZNF569Q5MCW4 686 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 MARK2Q7KZI7 788 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 SDR16C5Q8N3Y7 309 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 TAB3Q8N5C8 712 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 FAM181AQ8N9Y4 354 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 GPR26Q8NDV2 337 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 MAIP1Q8WWC4 291 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 EID2BQ96D98 161 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 TBL1YQ9BQ87 522 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 APOL2Q9BQE5 337 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 GORASP1Q9BQQ3 440 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 TLR10Q9BXR5 811 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 TMEM168Q9H0V1 697 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 GPR34Q9UPC5 381 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 NEUROG3Q9Y4Z2 214 aa13.89□□□□□ -0.19
PCDHGC3-208ENST00000622836 FADS2P1A8MWK0 482 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 ATP1A1P05023 1023 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 HMGCLP35914 325 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 DCDC1P59894 354 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 GALNT13Q8IUC8 556 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 TRAM1L1Q8N609 369 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 CCDC89Q8N998 374 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 IFI44Q8TCB0 444 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 GSDMCQ9BYG8 508 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 DPEP2Q9H4A9 486 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 PKP3Q9Y446 797 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 JRKLQ9Y4A0 524 aa13.88□□□□□ -0.19
PCDHGC3-208ENST00000622836 C2orf81A6NN90 581 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 E7EVH7 732 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 STX7O15400 261 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 KIF5CO60282 957 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 USP12O75317 370 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 DKK1O94907 266 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 SLC25A14O95258 325 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 IVLP07476 585 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 BPIP17213 487 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 LMAN1P49257 510 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 E2F1Q01094 437 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 OLIG2Q13516 323 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 GSE1Q14687 1217 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 ZDHHC20Q5W0Z9 365 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 GUSBP11Q6P575 273 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 GSTA5Q7RTV2 222 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 SLC35F3Q8IY50 421 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 ARL10Q8N8L6 244 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 CCL4L1Q8NHW4 92 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 COX14Q96I36 57 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 PLEKHG4BQ96PX9 1271 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 OR2M4Q96R27 311 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 WDR24Q96S15 920 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 BOCQ9BWV1 1114 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 PADI4Q9UM07 663 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 TPRP12270 2363 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-208ENST00000622836 CHD8Q9HCK8 2581 aa13.86□□□□□ -0.19
PCDHGC3-208ENST00000622836 LRP4O75096 1905 aa13.86□□□□□ -0.19
PCDHGC3-208ENST00000622836 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
PCDHGC3-208ENST00000622836 B4DGG1 531 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms