RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 IL23RQ5VWK5 629 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 GORASP1Q9BQQ3 440 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 TTPALQ9BTX7 342 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
GABRB3-215ENST00000622697 RHBGQ9H310 441 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 KLHL1Q9NR64 748 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 ARL5AQ9Y689 179 aa16.1■□□□□ 0.17
GABRB3-215ENST00000622697 TMEM233B4DJY2 109 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 MFN2O95140 757 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 NDST3O95803 873 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 MTHFRP42898 656 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 PARP15Q460N3 678 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 GATAD2AQ86YP4 633 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 ACBD6Q9BR61 282 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 NUAK2Q9H093 628 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 RAD21L1Q9H4I0 556 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 CCNA2P20248 432 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 GLUD2P49448 558 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 OR52B2Q96RD2 323 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 RPS6KA6Q9UK32 745 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TEX264Q9Y6I9 313 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 ZNF142P52746 1687 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 PRMT5O14744 637 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 KCNA10Q16322 511 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 PAGE2BQ5JRK9 111 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 C6orf89Q6UWU4 347 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 C2orf73Q8N5S3 287 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 SIDT2Q8NBJ9 832 aaKnown RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 VPS35Q96QK1 796 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TNKS2Q9H2K2 1166 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 RPS6KB2Q9UBS0 482 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 BBIP1A8MTZ0 92 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 OR4F21O95013 312 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 CYP3A5P20815 502 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 GABRR2P28476 465 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 SEMG2Q02383 582 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 EPS8Q12929 822 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 HIPK1Q86Z02 1210 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 UBASH3BQ8TF42 649 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 RNFT2Q96EX2 444 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TSPAN18Q96SJ8 248 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 IPPKQ9H8X2 491 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TMCO1Q9UM00 188 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 PIPSLA2A3N6 862 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TBC1D3BA6NDS4 549 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 STX16-NPEPL1H3BU86 382 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 ARHGAP1Q07960 439 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 CYP4Z2PQ8N1L4 340 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 RTL3Q8N8U3 475 aaKnown RBP16.09■□□□□ 0.17
GABRB3-215ENST00000622697 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
GABRB3-215ENST00000622697 ASNA1O43681 348 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 MYL12AP19105 171 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 TTKP33981 857 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 GALK1P51570 392 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 DPYSQ14117 519 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 SIM2Q14190 667 aaPredicted RBP16.08■□□□□ 0.17
GABRB3-215ENST00000622697 ATAD3BQ5T9A4 648 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 LUZP2Q86TE4 346 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 PROSER1Q86XN7 944 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 PSMA8Q8TAA3 256 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.17
GABRB3-215ENST00000622697 CCDC3Q9BQI4 270 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 RASSF1Q9NS23 344 aa16.08■□□□□ 0.17
GABRB3-215ENST00000622697 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 TSPAN19P0C672 248 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 HPGDP15428 266 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 IRGQQ8WZA9 623 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 NMUR1Q9HB89 426 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 EIF2B4Q9UI10 523 aaKnown RBP16.08■□□□□ 0.16
GABRB3-215ENST00000622697 SIX4Q9UIU6 781 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 PPM1HQ9ULR3 514 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 CNTN6Q9UQ52 1028 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 RPL17P18621 184 aaKnown RBP16.08■□□□□ 0.16
GABRB3-215ENST00000622697 GPR1P46091 355 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 RGS21Q2M5E4 152 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
GABRB3-215ENST00000622697 ITCHQ96J02 903 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 CLDN11O75508 207 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 SEC24AO95486 1093 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 ECHS1P30084 290 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 SPIBQ01892 262 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 TMEM110Q86TL2 294 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 TBC1D21Q8IYX1 336 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 STYXQ8WUJ0 223 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 STARD8Q92502 1023 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 FTHL17Q9BXU8 183 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 EIF2B3Q9NR50 452 aaKnown RBP16.08■□□□□ 0.16
GABRB3-215ENST00000622697 CD84Q9UIB8 345 aa16.08■□□□□ 0.16
GABRB3-215ENST00000622697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.07■□□□□ 0.16
GABRB3-215ENST00000622697 MAPK9P45984 424 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms