RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GOT2P00505 430 aaKnown RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 UMPSP11172 480 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 TSHRP16473 764 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 NEK3P51956 506 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 C1QTNF8P60827 252 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CACNG1Q06432 222 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 INCA1Q0VD86 236 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 PPM1JQ5JR12 505 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 TBCELQ5QJ74 424 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 ZDHHC20Q5W0Z9 365 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 OR13C4Q8NGS5 318 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 KCTD13Q8WZ19 329 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 AZIN2Q96A70 460 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 VPS33AQ96AX1 596 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 RNF145Q96MT1 663 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 NDEL1Q9GZM8 345 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 OR2AG1Q9H205 316 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 MRPS33Q9Y291 106 aaKnown RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 FAM186AA6NE01 2351 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 NPEPPSL1A6NEC2 478 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 RHPN2P1A8MT19 583 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 GRIN2DO15399 1336 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 GPR32O75388 356 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ZMPSTE24O75844 475 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ALPIP09923 528 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 LINC00032P0C843 101 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ATP6V1B1P15313 513 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 MFSD5Q6N075 450 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 NAPRTQ6XQN6 538 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ZBTB49Q6ZSB9 765 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 C10orf107Q8IVU9 208 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 DNAJB14Q8TBM8 379 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 APOLD1Q96LR9 279 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 PPP3R2Q96LZ3 170 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 TMEM237Q96Q45 408 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 SLC38A3Q99624 504 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 GMEB2Q9UKD1 530 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 IGKV6-21A0A0C4DH24 114 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 OR51F1A6NGY5 319 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 PTGESO14684 152 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 LCA5LO95447 670 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 AKT2P31751 481 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 HSPA7P48741 367 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 NOVP48745 357 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 POLD2P49005 469 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 CLK1P49759 484 aaKnown RBP9.21□□□□□ -0.94
GGA3-223ENST00000621870 ITIH4Q14624 930 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ZNHIT3Q15649 155 aaPredicted RBP9.21□□□□□ -0.94
GGA3-223ENST00000621870 AMZ1Q400G9 498 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 UBXN11Q5T124 520 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 TRABD2AQ86V40 505 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 OR10T2Q8NGX3 314 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.94
GGA3-223ENST00000621870 LMLNQ96KR4 655 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 SMOC2Q9H3U7 446 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 CARS2Q9HA77 564 aaKnown RBP9.21□□□□□ -0.94
GGA3-223ENST00000621870 ZDHHC4Q9NPG8 344 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 ACTL7BQ9Y614 415 aa9.21□□□□□ -0.94
GGA3-223ENST00000621870 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
GGA3-223ENST00000621870 WNT9AO14904 365 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 LYPLA1O75608 230 aaPredicted RBP9.2□□□□□ -0.94
GGA3-223ENST00000621870 ACP5P13686 325 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 PTPN4P29074 926 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 BMPR1AP36894 532 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 MTHFRP42898 656 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 RAD23AP54725 363 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 PITX1P78337 314 aaPredicted RBP9.2□□□□□ -0.94
GGA3-223ENST00000621870 NTHL1P78549 312 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 TEAD4Q15561 434 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 LIPMQ5VYY2 423 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 TRMT10BQ6PF06 316 aaKnown RBP9.2□□□□□ -0.94
GGA3-223ENST00000621870 ENPP7Q6UWV6 458 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 GDPD4Q6W3E5 623 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 GPR180Q86V85 440 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 CLYBLQ8N0X4 340 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 FAM46DQ8NEK8 389 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 CLHC1Q8NHS4 586 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 RIN3Q8TB24 985 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 KXD1Q9BQD3 176 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 OSBPL2Q9H1P3 480 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 C12orf65Q9H3J6 166 aaKnown RBP9.2□□□□□ -0.94
GGA3-223ENST00000621870 R3HDMLQ9H3Y0 253 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 RXFP1Q9HBX9 757 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 COMMD8Q9NX08 183 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 FAM53CQ9NYF3 392 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 SLC17A7Q9P2U7 560 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 GGA2Q9UJY4 613 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 TIMM22Q9Y584 194 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 CRYBG1Q9Y4K1 1723 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 SAC3D1A6NKF1 404 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 H3BN98 237 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 LEFTY2O00292 366 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 HS6ST1O60243 411 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 VPS4BO75351 444 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 HLA-DQB2P05538 268 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 SCNN1AP37088 669 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 TAS2R39P59534 338 aa9.2□□□□□ -0.94
GGA3-223ENST00000621870 OGDHQ02218 1023 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms