RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ADORA2AP29274 412 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 BLVRAP53004 296 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 OLR1P78380 273 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 TAZQ16635 292 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 GRTP1Q5TC63 336 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 C2orf69Q8N8R5 385 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.35□□□□□ -0.75
VPS11-207ENST00000620429 NDNFQ8TB73 568 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 NSUN6Q8TEA1 469 aaKnown RBP10.35□□□□□ -0.75
VPS11-207ENST00000620429 CANT1Q8WVQ1 401 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 TFAP2BQ92481 460 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 CENPNQ96H22 339 aaPredicted RBP10.35□□□□□ -0.75
VPS11-207ENST00000620429 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS11-207ENST00000620429 FBXL12Q9NXK8 326 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 AP4E1Q9UPM8 1137 aa10.35□□□□□ -0.75
VPS11-207ENST00000620429 RLFQ13129 1914 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 HMX3A6NHT5 357 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 H0YCG3 227 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 CHADO15335 359 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 B4GAT1O43505 415 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 XYLBO75191 536 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 APOA1P02647 267 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 IFNA16P05015 189 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 PSKH1P11801 424 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 OSBPP22059 807 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ELK4P28324 431 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DEFA1P59665 94 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DEFA3P59666 94 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DOCK1Q14185 1865 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 RGMBQ6NW40 437 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 SCARA5Q6ZMJ2 495 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 APOBEC3FQ8IUX4 373 aaKnown RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ZNF781Q8N8C0 355 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ZFAND1Q8TCF1 268 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 NXNL1Q96CM4 212 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 GPRASP2Q96D09 838 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DMRTB1Q96MA1 342 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ZNF518BQ9C0D4 1074 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 MCOLN1Q9GZU1 580 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 POPDC2Q9HBU9 364 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 CISHQ9NSE2 258 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 SFMBT1Q9UHJ3 866 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ZNF175Q9Y473 711 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 AUP1Q9Y679 476 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 NRP1O14786 923 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 USP2O75604 605 aaPredicted RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 SERPINI2O75830 405 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 FGF18O76093 207 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 OR5F1O95221 314 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ALBP02768 609 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 CD19P15391 556 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 CBLP22681 906 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 MIPP30301 263 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 AXLP30530 894 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 FMO4P31512 558 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 GP2P55259 537 aaKnown RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 GPR85P60893 370 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ACAP2Q15057 778 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 PLCL1Q15111 1095 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 MTERF2Q49AM1 385 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 PTPN20Q4JDL3 420 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 PNCKQ6P2M8 343 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DENND1BQ6P3S1 775 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 XKRXQ6PP77 449 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 PLCZ1Q86YW0 608 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 KIAA1958Q8N8K9 716 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 UBXN10Q96LJ8 280 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 C12orf42Q96LP6 360 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 RPRD1AQ96P16 312 aaPredicted RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 CPXM1Q96SM3 734 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 ZFP14Q9HCL3 533 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 JPH1Q9HDC5 661 aaPredicted RBP10.34□□□□□ -0.75
VPS11-207ENST00000620429 CYP26B1Q9NR63 512 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DCDC2Q9UHG0 476 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 KCNE2Q9Y6J6 123 aa10.34□□□□□ -0.75
VPS11-207ENST00000620429 DOCK5Q9H7D0 1870 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PARP14Q460N5 1801 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PCNTO95613 3336 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 PABPN1LA6NDY0 278 aaKnown RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 KCNN4O15554 427 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 SH3BP5O60239 455 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 OLFM2O95897 454 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 S100A6P06703 90 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 APRTP07741 180 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 FASP25445 335 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 MAGEA11P43364 429 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 MYL6P60660 151 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 VGLL4Q14135 290 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PARP15Q460N3 678 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TMEM236Q5W0B7 351 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 CYP2R1Q6VVX0 501 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms