RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 OR1I1O60431 355 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 ATP6V1G2O95670 118 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SLC6A11P48066 632 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 ALDH18A1P54886 795 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 DBN1Q16643 649 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 FAM83EQ2M2I3 478 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 MAVSQ7Z434 540 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 TREML1Q86YW5 311 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 ANKRD49Q8WVL7 239 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 LPGAT1Q92604 370 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 VOPP1Q96AW1 172 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 KLHL32Q96NJ5 620 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 TBC1D10AQ9BXI6 508 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 CPEB1Q9BZB8 566 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 LRMDAQ9H2I8 198 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 KCNK4Q9NYG8 393 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 MID2Q9UJV3 735 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SLC8A2Q9UPR5 921 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 FAM50BQ9Y247 325 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SLC27A6Q9Y2P4 619 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 ATP5BP06576 529 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SBK3P0C264 359 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 TTPAP49638 278 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 GRM2Q14416 872 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 PDGFRLQ15198 375 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 SNCBQ16143 134 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 USP45Q70EL2 814 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 GPR78Q96P69 363 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 MIPEPQ99797 713 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 AARSD1Q9BTE6 412 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
TNFAIP3-209ENST00000619035 PFDN6O15212 129 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ASLP04424 464 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 LTA4HP09960 611 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 FDXRP22570 491 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 FCARP24071 287 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 GRK2P25098 689 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 KPNA2P52292 529 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 XIAPP98170 497 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 PTPRNQ16849 979 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 POM121L1PQ3SYA9 428 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 AGAP9Q5VTM2 703 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 LRRC66Q68CR7 880 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 KLC3Q6P597 504 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 TMEM207Q6UWW9 146 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 VITQ6UXI7 678 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 GDPD4Q6W3E5 623 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZYG11AQ6WRX3 759 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 RINLQ6ZS11 566 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 LONP2Q86WA8 852 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 TMEM151AQ8N4L1 468 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 PIWIL2Q8TC59 973 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 FRS2Q8WU20 508 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ECHDC3Q96DC8 303 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 PTCD3Q96EY7 689 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 SHCBP1LQ9BZQ2 653 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 MRPL46Q9H2W6 279 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 DEC1Q9P2X7 70 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 CDH7Q9ULB5 785 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 CORO1CQ9ULV4 474 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 H7C0S8 307 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 TRIM13O60858 407 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 LEFTY1O75610 366 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 CACNG1Q06432 222 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ADAM15Q13444 863 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 RCN2Q14257 317 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 CES5AQ6NT32 575 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZNF781Q8N8C0 355 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 RDH11Q8TC12 318 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 PPP4R1Q8TF05 950 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 NAT14Q8WUY8 206 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 SCRN2Q96FV2 425 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZNF641Q96N77 438 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 TCF12Q99081 682 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 KXD1Q9BQD3 176 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 HEPHQ9BQS7 1158 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 OXSMQ9NWU1 459 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
TNFAIP3-209ENST00000619035 KIF26AQ9ULI4 1882 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 PRRT4C9JH25 899 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms