RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	RRAGA	Q7L523	313 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LHFPL3	Q86UP9	236 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ENTHD1	Q8IYW4	607 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PHACTR4	Q8IZ21	702 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CNBD1	Q8NA66	436 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ATG16L2	Q8NAA4	619 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF248	Q8NDW4	579 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	STEAP2	Q8NFT2	490 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CD300LF	Q8TDQ1	290 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CPT1B	Q92523	772 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KTI12	Q96EK9	354 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FER1L6-AS2	Q96M78	137 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CCNL2	Q96S94	520 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	INSM2	Q96T92	566 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OSBPL1A	Q9BXW6	950 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LRRC3	Q9BY71	257 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DDX47	Q9H0S4	455 aa	Known RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR52A5	Q9H2C5	316 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR51B6	Q9H340	312 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RNPEP	Q9H4A4	650 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CYP3A43	Q9HB55	503 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZDHHC4	Q9NPG8	344 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	APEX2	Q9UBZ4	518 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLX4	Q8IY92	1834 aa		4.08	□□□□□ -1.76
UBE2D3-233	ENST00000618836		A0A0J9YYE9	177 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RAB19	A4D1S5	217 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PFDN6	O15212	129 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NOS1AP	O75052	506 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CDH16	O75309	829 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ECI2	O75521	394 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRDM1	O75626	825 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZFPL1	O95159	310 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DEXI	O95424	95 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRBC1	P01850	177 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CAPN1	P07384	714 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SERPINA6	P08185	405 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SUPT20HL2	P0C7V6	817 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PLA2G4B	P0C869	781 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CD1B	P29016	333 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GSTT1	P30711	240 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GRK5	P34947	590 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CRAT	P43155	626 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NEK4	P51957	841 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SELENOV	P59797	346 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PHC1	P78364	1004 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	UBE3A	Q05086	875 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PMS2P11	Q13670	270 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCNMB1	Q16558	191 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TWISTNB	Q3B726	338 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF628	Q5EBL2	1059 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF311	Q5JNZ3	666 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HES5	Q5TA89	166 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	STEAP3	Q658P3	488 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCTD16	Q68DU8	428 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PET117	Q6UWS5	81 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GPR141	Q7Z602	305 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C19orf47	Q8N9M1	422 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FNDC5	Q8NAU1	212 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RASSF5	Q8WWW0	418 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RAPGEF4	Q8WZA2	1011 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MYDGF	Q969H8	173 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DNAJC1	Q96KC8	554 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MIPEP	Q99797	713 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TMEM175	Q9BSA9	504 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TIPIN	Q9BVW5	301 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	COLEC11	Q9BWP8	271 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C1QTNF7	Q9BXJ2	289 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	IMPG2	Q9BZV3	1241 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KANSL3	Q9P2N6	904 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	THEG	Q9P2T0	379 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TJP2	Q9UDY2	1190 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GABRQ	Q9UN88	632 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC9A8	Q9Y2E8	581 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HBS1L	Q9Y450	684 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PLEKHH1	Q9ULM0	1364 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SOBP	A7XYQ1	873 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836		H3BNC9	293 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TOR1A	O14656	332 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	VILL	O15195	856 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DYNC1LI2	O43237	492 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	VPS4B	O75351	444 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RPP14	O95059	124 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SNAP29	O95721	258 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FABP1	P07148	127 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GSTP1	P09211	210 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CTXN2	P0C2S0	81 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	UBTFL1	P0CB47	393 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CYP2A7	P20853	494 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NT5E	P21589	574 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CYP2C18	P33260	490 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GRK3	P35626	688 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CTSO	P43234	321 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HOXA1	P49639	335 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CLK3	P49761	638 aa	Known RBP	4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ARSE	P51690	589 aa		4.07	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ATP6V0D1	P61421	351 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms