RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 LRRC8AQ8IWT6 810 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 RNF10Q8N5U6 811 aaKnown RBP15.93■□□□□ 0.14
BRCA1-228ENST00000618469 FAM181AQ8N9Y4 354 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 TEX101Q9BY14 249 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 GRPEL1Q9HAV7 217 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 CYP4F12Q9HCS2 524 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 PKD2L2Q9NZM6 624 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 FAM153AQ9UHL3 310 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 ZNF711Q9Y462 761 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 DGKBQ9Y6T7 804 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 U3KQA8 63 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 TENM4Q6N022 2769 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 GOLGA6L9A6NEM1 432 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TNFRSF10CO14798 259 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 NRDCO43847 1150 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 NDST3O95803 873 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TNFP01375 233 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CCDC175P0C221 793 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 RBP3P10745 1247 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CDK4P11802 303 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TEAD1P28347 426 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TNNT3P45378 269 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CCZ1BP86790 482 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TARDBPQ13148 414 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CDKN3Q16667 212 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 C6orf132Q5T0Z8 1188 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 HES3Q5TGS1 186 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TRIM74Q86UV6 250 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 NRSN1Q8IZ57 195 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 IPMKQ8NFU5 416 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CCHCR1Q8TD31 782 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 HES6Q96HZ4 224 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 FCRL5Q96RD9 977 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 FERMT1Q9BQL6 677 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 RIOK2Q9BVS4 552 aaKnown RBP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 BOCQ9BWV1 1114 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 FRMD8Q9BZ67 464 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 GBA3Q9H227 469 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 CARS2Q9HA77 564 aaKnown RBP15.92■□□□□ 0.14
BRCA1-228ENST00000618469 USP29Q9HBJ7 922 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 LZTFL1Q9NQ48 299 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 SIRPGQ9P1W8 387 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 SHOC2Q9UQ13 582 aa15.92■□□□□ 0.14
BRCA1-228ENST00000618469 TK2O00142 265 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 INPP4BO15327 924 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 YY2O15391 372 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 KCNN4O15554 427 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 STK10O94804 968 aaKnown RBP15.91■□□□□ 0.14
BRCA1-228ENST00000618469 PYGLP06737 847 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 SPINT3P49223 89 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 DUSP3P51452 185 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-228ENST00000618469 WNT3AP56704 352 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 CCDC173Q0VFZ6 552 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 NR0B2Q15466 257 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 ITPRIPL1Q6GPH6 555 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 CCDC70Q6NSX1 233 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 GUSBP11Q6P575 273 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 DARS2Q6PI48 645 aaKnown RBP15.91■□□□□ 0.14
BRCA1-228ENST00000618469 KDELC1Q6UW63 502 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 ADAMTSL4Q6UY14 1074 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 GKN2Q86XP6 184 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 SLC35F3Q8IY50 421 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 KYQ8NBH2 561 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 IFI44Q8TCB0 444 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 GLMNQ92990 594 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 NXPE2Q96DL1 559 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 OXNAD1Q96HP4 312 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-228ENST00000618469 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 FSD1LQ9BXM9 530 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 TMEM168Q9H0V1 697 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 ZFYVE1Q9HBF4 777 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 NCKIPSDQ9NZQ3 722 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 TRHDEQ9UKU6 1024 aa15.91■□□□□ 0.14
BRCA1-228ENST00000618469 ZNF462Q96JM2 2506 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 CPED1A4D0V7 1026 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 GOLGA6L3A6NEY3 463 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 CEACAM5P06731 702 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 CHRNA4P43681 627 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 GNPDA1P46926 289 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 MPP3Q13368 585 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 HENMT1Q5T8I9 393 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 ALS2CLQ60I27 953 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 PCSK4Q6UW60 755 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 EFL1Q7Z2Z2 1120 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 TMPRSS12Q86WS5 348 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 RAVER1Q8IY67 606 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 ARL10Q8N8L6 244 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 SCG3Q8WXD2 468 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 NAF1Q96HR8 494 aaKnown RBP15.9■□□□□ 0.14
BRCA1-228ENST00000618469 MRGPRX2Q96LB1 330 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 ALS2CR12Q96Q35 445 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 GPR63Q9BZJ6 419 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 SUFUQ9UMX1 484 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 GPR34Q9UPC5 381 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 SPO11Q9Y5K1 396 aa15.9■□□□□ 0.14
BRCA1-228ENST00000618469 RRP8O43159 456 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms