RNA–Protein interactions for RNA: ENST00000617626.1

U1.41-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.41-201ENST00000617626 ZSCAN32Q9NX65 697 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 FBXL12Q9NXK8 326 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 NKIRAS1Q9NYS0 192 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 SMARCAL1Q9NZC9 954 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 PCYOX1Q9UHG3 505 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 CYP8B1Q9UNU6 501 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 PCDHB9Q9Y5E1 797 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
U1.41-201ENST00000617626 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.62□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3DA0A087WVF3 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3IA0A087WXS9 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3EA0A087X179 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3KA0A087X1G2 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TSPAN11A1L157 253 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TTC24A2A3L6 582 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3FA6NER0 549 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 UPK3BL1B0FP48 263 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3LB9A6J9 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 UPK3BL2E5RIL1 263 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 AP3B1O00203 1094 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 LSM1O15116 133 aaKnown RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 AP1G1O43747 822 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 GFRA3O60609 400 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PGLSO95336 258 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CTSLP07711 333 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 ITGA2BP08514 1039 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 KRT16P08779 473 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3HP0C7X1 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 ADRB3P13945 408 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PORP16435 677 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 HLA-DPA1P20036 260 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 SERPINB3P29508 390 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CD6P30203 668 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 GRIA4P48058 902 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PTDSS1P48651 473 aaKnown RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 PXNP49023 591 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 FNTBP49356 437 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TPMTP51580 245 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 GDF10P55107 478 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 KCNJ2P63252 427 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 BASP1P80723 227 aaKnown RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 HPCAP84074 193 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CDK18Q07002 472 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 NIPAL4Q0D2K0 466 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 GPS1Q13098 491 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 ARHGEF7Q14155 803 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CNPY1Q3B7I2 92 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3GQ6DHY5 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3CQ6IPX1 549 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 NAPEPLDQ6IQ20 393 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TTC27Q6P3X3 843 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 B3GNT6Q6ZMB0 384 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 USP45Q70EL2 814 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CEP68Q76N32 757 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PCGF5Q86SE9 256 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 LINC00523Q86TU6 105 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 FAM124AQ86V42 546 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PEX5LQ8IYB4 626 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBC1D3Q8IZP1 549 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
U1.41-201ENST00000617626 IPMKQ8NFU5 416 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 OR2T34Q8NGX1 318 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 OR14C36Q8NHC7 312 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 SPATA22Q8NHS9 363 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 ARRDC2Q8TBH0 407 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 ARRDC3Q96B67 414 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 FEM1CQ96JP0 617 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 FMO2Q99518 471 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CGREF1Q99674 301 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TBL1YQ9BQ87 522 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 MLPHQ9BV36 600 aaPredicted RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 TMEM109Q9BVC6 243 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 YIPF2Q9BWQ6 316 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 TDRD1Q9BXT4 1180 aaKnown RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 C2orf42Q9NWW7 574 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 USP36Q9P275 1121 aaKnown RBP6.61□□□□□ -1.35
U1.41-201ENST00000617626 ASIC3Q9UHC3 531 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 SARDHQ9UL12 918 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 RAB23Q9ULC3 237 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 CHKBQ9Y259 395 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 PCDHGA2Q9Y5H1 932 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 SPTBN4Q9H254 2564 aa6.61□□□□□ -1.35
U1.41-201ENST00000617626 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 PLXND1Q9Y4D7 1925 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 CACNA1HO95180 2353 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 FAM187AA6NFU0 413 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 FAM47DPA6NHR8 397 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
U1.41-201ENST00000617626 F5H423 210 aaPredicted RBP6.6□□□□□ -1.35
U1.41-201ENST00000617626 H0Y858 1186 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 GOLGA8TH3BQL2 631 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 HTRA2O43464 458 aaPredicted RBP6.6□□□□□ -1.35
U1.41-201ENST00000617626 TSPAN6O43657 245 aa6.6□□□□□ -1.35
U1.41-201ENST00000617626 PLRG1O43660 514 aaKnown RBP6.6□□□□□ -1.35
U1.41-201ENST00000617626 PEX11AO75192 247 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms