RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 FAM117BQ6P1L5 589 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC30A9Q6PML9 568 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 TRAF7Q6Q0C0 670 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 CYHR1Q6ZMK1 362 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 GLT6D1Q7Z4J2 308 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 ST13P4Q8IZP2 240 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 LPGAT1Q92604 370 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 ERVK-6Q9BXR3 956 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 MUC3BQ9H195 1237 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 PAPOLBQ9NRJ5 636 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 QPCTLQ9NXS2 382 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 C6orf203Q9P0P8 240 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 DNAJC15Q9Y5T4 150 aa13.85□□□□□ -0.19
CACNA1C-231ENST00000616390 PRORSD1PA6NEY8 169 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 PIP5K1BO14986 540 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 BCAS2O75934 225 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 FGF1P05230 155 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ATF6P18850 670 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 STX1BP61266 288 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 GNA12Q03113 381 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 HERC3Q15034 1050 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 VPS26BQ4G0F5 336 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 NEK10Q6ZWH5 1172 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 AMIGO2Q86SJ2 522 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 PPWD1Q96BP3 646 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 TUBGCP3Q96CW5 907 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 FAR2Q96K12 515 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 POLR3BQ9NW08 1133 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 RNF112Q9ULX5 631 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 TMEM221A6NGB7 291 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 PDLIM1O00151 329 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ACOT8O14734 319 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC22A2O15244 555 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 OR1I1O60431 355 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 CDK14O94921 469 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ATP6V1B1P15313 513 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 FDXRP22570 491 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 EEF1DP29692 281 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 LRP8Q14114 963 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 HABP4Q5JVS0 413 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 RAB44Q7Z6P3 723 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 MDGA1Q8NFP4 955 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 LRTOMTQ8WZ04 291 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 EME1Q96AY2 570 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 SMPD4Q9NXE4 827 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 BCAP29Q9UHQ4 241 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 PLXNA3P51805 1871 aa13.84□□□□□ -0.19
CACNA1C-231ENST00000616390 GOLGA8CPA6NN73 597 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 TBKBP1A7MCY6 615 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 CDC7O00311 574 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 ENPP3O14638 875 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 NRP2O60462 931 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 AOC2O75106 756 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 NDUFS3O75489 264 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 CRTAMO95727 393 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 NELFEP18615 380 aaKnown RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 HLA-DPA1P20036 260 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 GRIA2P42262 883 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 CASP2P42575 452 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 MAGEA11P43364 429 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 AGTR2P50052 363 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC7A2P52569 658 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 OXCT1P55809 520 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 TRIM25Q14258 630 aaKnown RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 MYBPC3Q14896 1274 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 RPS6KA2Q15349 733 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 CHSY3Q70JA7 882 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 FAM110BQ8TC76 370 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 TWIST2Q8WVJ9 160 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 GPR21Q99679 349 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 FNIP2Q9P278 1114 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 RIMS3Q9UJD0 308 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 AP4B1Q9Y6B7 739 aa13.83□□□□□ -0.19
CACNA1C-231ENST00000616390 FRMPD3Q5JV73 1810 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 C15orf38-AP3S2A0A0A6YYH1 394 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 PEX1O43933 1283 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 ACSL4O60488 711 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 NBNO60934 754 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 CHRM3P20309 590 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 STC1P52823 247 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 GPR17Q13304 367 aa13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 CAPRIN1Q14444 709 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-231ENST00000616390 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms