RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SUFUQ9UMX1 484 aa18.89■□□□□ 0.61
CDX1-202ENST00000616154 PPIL1Q9Y3C6 166 aa18.89■□□□□ 0.61
CDX1-202ENST00000616154 EPN1Q9Y6I3 576 aaPredicted RBP18.89■□□□□ 0.61
CDX1-202ENST00000616154 SDK2Q58EX2 2172 aa18.89■□□□□ 0.61
CDX1-202ENST00000616154 SPTA1P02549 2419 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 C3orf70A6NLC5 250 aaPredicted RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 RHPN2P1A8MT19 583 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 C9orf172C9J069 976 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 ZW10O43264 779 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 NDUFA10O95299 355 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 IVLP07476 585 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 KDELR1P24390 212 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 AK4P27144 223 aaPredicted RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 CD82P27701 267 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 CYLC1P35663 651 aaPredicted RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 SLC1A1P43005 524 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 OR1D5P58170 312 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 DPTQ07507 201 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 SRSF6Q13247 344 aaKnown RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 PEX6Q13608 980 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 MESDQ14696 234 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 ARMC12Q5T9G4 340 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 RAET1GQ6H3X3 334 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 Q6ZVL8 140 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 USP45Q70EL2 814 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 TSPAN33Q86UF1 283 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 PTCD2Q8WV60 388 aaKnown RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 RAPGEF5Q92565 580 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 RDH14Q9HBH5 336 aa18.88■□□□□ 0.61
CDX1-202ENST00000616154 AKAP7Q9P0M2 348 aaPredicted RBP18.88■□□□□ 0.61
CDX1-202ENST00000616154 AGRPO00253 132 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 NRDCO43847 1150 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 ECEL1O95672 775 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 ITGB2P05107 769 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 CCNCP24863 283 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 GPR3P46089 330 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 MAPK10P53779 464 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 CTBSQ01459 385 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 IFI16Q16666 785 aaKnown RBP18.87■□□□□ 0.61
CDX1-202ENST00000616154 LINC00303Q3SY05 128 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 AMZ1Q400G9 498 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 MANEAQ5SRI9 462 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 TIGD7Q6NT04 549 aaPredicted RBP18.87■□□□□ 0.61
CDX1-202ENST00000616154 SLC30A9Q6PML9 568 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 XKR5Q6UX68 686 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 TECPR1Q7Z6L1 1165 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 ZFAND4Q86XD8 727 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 DTX1Q86Y01 620 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 EXD3Q8N9H8 876 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 PIH1D2Q8WWB5 315 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 HDAC11Q96DB2 347 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 SCARF2Q96GP6 870 aaPredicted RBP18.87■□□□□ 0.61
CDX1-202ENST00000616154 RNF157Q96PX1 679 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 NUDT22Q9BRQ3 303 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 REXO2Q9Y3B8 237 aaKnown RBP18.87■□□□□ 0.61
CDX1-202ENST00000616154 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
CDX1-202ENST00000616154 BOD1L1Q8NFC6 3051 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 GOLGA6CA6NDK9 693 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 GOLGA6BA6NDN3 693 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.86■□□□□ 0.61
CDX1-202ENST00000616154 HGSO14964 777 aaPredicted RBP18.86■□□□□ 0.61
CDX1-202ENST00000616154 MATN3O15232 486 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 GOLGA6DP0CG33 693 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 MX2P20592 715 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 ALDH4A1P30038 563 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 GJC1P36383 396 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 ADCY8P40145 1251 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 POLD2P49005 469 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 GBE1Q04446 702 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 PTPRRQ15256 657 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 SLC9A4Q6AI14 798 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 ZNF574Q6ZN55 896 aaPredicted RBP18.86■□□□□ 0.61
CDX1-202ENST00000616154 NAGSQ8N159 534 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 PATE1Q8WXA2 126 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 ZNF830Q96NB3 372 aaPredicted RBP18.86■□□□□ 0.61
CDX1-202ENST00000616154 GOLGA6AQ9NYA3 693 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 DTLQ9NZJ0 730 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 PCDHB11Q9Y5F2 797 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 PCDHGA4Q9Y5G9 962 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 BSNQ9UPA5 3926 aa18.86■□□□□ 0.61
CDX1-202ENST00000616154 IGHV5-10-1A0A0J9YXX1 117 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 FZD6O60353 706 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 SOD1P00441 154 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 KRT10P13645 584 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 CTPS1P17812 591 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 CES1P23141 567 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 CD1CP29017 333 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 GPR1P46091 355 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 SLC10A2Q12908 348 aaPredicted RBP18.85■□□□□ 0.61
CDX1-202ENST00000616154 TMEM164Q5U3C3 297 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 VASH2Q86V25 355 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 NLRP8Q86W28 1048 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 NDUFAF2Q8N183 169 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 PLD5Q8N7P1 536 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 AP2M1Q96CW1 435 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 SEMA3CQ99985 751 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 POLR1EQ9GZS1 481 aaKnown RBP18.85■□□□□ 0.61
CDX1-202ENST00000616154 CDH19Q9H159 772 aa18.85■□□□□ 0.61
CDX1-202ENST00000616154 ABCG8Q9H221 673 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms