RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 BORCS7-ASMTA0A0B4J1R7 106 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 FAM102AQ5T9C2 384 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 NIPAL3Q6P499 406 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ABI1Q8IZP0 508 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 BPIFB1Q8TDL5 484 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 STK35Q8TDR2 534 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RUSC1Q9BVN2 902 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RNF146Q9NTX7 359 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SH3BGRL2Q9UJC5 107 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 IFNGP01579 166 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SERPINE1P05121 402 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PPIL2Q13356 520 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 DSG2Q14126 1118 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TFDP3Q5H9I0 405 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 KATNAL2Q8IYT4 538 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 POLD4Q9HCU8 107 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PRMT7Q9NVM4 692 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PCDHGA8Q9Y5G5 932 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TSPAN15O95858 294 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ALADP13716 330 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 MPP7Q5T2T1 576 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CORO6Q6QEF8 472 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 DGLUCYQ7Z3D6 616 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CHST13Q8NET6 341 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF419Q96HQ0 510 aaPredicted RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 TIMM29Q9BSF4 260 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PRPF19Q9UMS4 504 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 LRRC37A3O60309 1634 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SLC34A2O95436 690 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 NUDT17P0C025 328 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 GPSM2P81274 684 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 FKBP1CQ5VVH2 108 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 OR52K1Q8NGK4 314 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SCGB1C1Q8TD33 95 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZDHHC15Q96MV8 337 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 WDR41Q9HAD4 459 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PRKAG2Q9UGJ0 569 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF232Q9UNY5 417 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 POMT1Q9Y6A1 747 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 OAS3Q9Y6K5 1087 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 RBAK-RBAKDNI3L0D1 243 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 VPS26AO75436 327 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ASMTP46597 345 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CYP2R1Q6VVX0 501 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZDHHC17Q8IUH5 632 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 OR5T1Q8NG75 326 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 FABP12A6NFH5 140 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SHOXO15266 292 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 NDUFB10O96000 172 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CDK7P50613 346 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 RBP5P82980 135 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PUM1Q14671 1186 aaKnown RBP eCLIP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 COX15Q7KZN9 410 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SDR16C5Q8N3Y7 309 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 NXPE2Q96DL1 559 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 TNKS2Q9H2K2 1166 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SLA2Q9H6Q3 261 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SMURF2Q9HAU4 748 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 C20orf202A1L168 122 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 BGNP21810 368 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 RPS3P23396 243 aaKnown RBP eCLIP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CD6P30203 668 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SLC6A4P31645 630 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF460Q14592 562 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SLC9A9Q8IVB4 645 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SPARTQ8N0X7 666 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 BORCS7Q96B45 105 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 MUC13Q9H3R2 512 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PREBQ9HCU5 417 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ARHGAP20Q9P2F6 1191 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 LNPEPQ9UIQ6 1025 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ERVK-19Q9WJR5 959 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SDR42E2A6NKP2 422 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 SLC22A1O15245 554 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF208O43345 1280 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ABHD2P08910 425 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 TNNI3P19429 210 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 RAB35Q15286 201 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ATCAYQ86WG3 371 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 CACUL1Q86Y37 369 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 AGBL3Q8NEM8 1001 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 PHF10Q8WUB8 498 aaKnown RBP9.25□□□□□ -0.93
COL12A1-211ENST00000615798 UCMAQ8WVF2 138 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 DHRS12A0PJE2 317 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 COMTP21964 271 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 MAGEA11P43364 429 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 ERVK-25P63136 954 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 MTAPQ13126 283 aa9.25□□□□□ -0.93
COL12A1-211ENST00000615798 BCL2A1Q16548 175 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms