RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ITPAQ9BY32 194 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 TREM1Q9NP99 234 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 CYP3A5P20815 502 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 TMEM214Q6NUQ4 689 aaKnown RBP13.73□□□□□ -0.21
CHD1-212ENST00000614616 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 C9orf43Q8TAL5 461 aaPredicted RBP13.73□□□□□ -0.21
CHD1-212ENST00000614616 DPAGT1Q9H3H5 408 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
CHD1-212ENST00000614616 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 AZIN1O14977 448 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 TFEBP19484 476 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 TNFRSF25Q93038 417 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 KCTD7Q96MP8 289 aa13.73□□□□□ -0.21
CHD1-212ENST00000614616 RCOR3Q9P2K3 495 aaPredicted RBP13.73□□□□□ -0.21
CHD1-212ENST00000614616 OAS3Q9Y6K5 1087 aaKnown RBP13.73□□□□□ -0.21
CHD1-212ENST00000614616 IFT172Q9UG01 1749 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RFPL2O75678 378 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 AP2S1P53680 142 aaPredicted RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 DNAJA4Q8WW22 397 aaPredicted RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 RPN2P04844 631 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 SLC6A4P31645 630 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 USP29Q9HBJ7 922 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 ATP6AP2A0A1C7CYW4 349 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 HNRNPLP14866 589 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHD1-212ENST00000614616 BMP7P18075 431 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 PTPN20Q4JDL3 420 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 ZNF696Q9H7X3 374 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 A6NHS1 94 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 MNDAP41218 407 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 HLFQ16534 295 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 IER5Q5VY09 327 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RPTNQ6XPR3 784 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 NECTIN3Q9NQS3 549 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 SREBF1P36956 1147 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RAB39AQ14964 217 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 USP7Q93009 1102 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 TCEAL7Q9BRU2 100 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 CPS1P31327 1500 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 UGT2B17O75795 530 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 PLATP00750 562 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 CYBBP04839 570 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 IFNA6P05013 189 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 NCK1P16333 377 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 GLT6D1Q7Z4J2 308 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
CHD1-212ENST00000614616 NKIRAS2Q9NYR9 191 aa13.72□□□□□ -0.21
CHD1-212ENST00000614616 hCG_1818297A0A087WSY0 165 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 DNTTP04053 509 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 COL6A2P12110 1019 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 HPGDP15428 266 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 MPSTP25325 297 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 TAS2R41P59536 307 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 CRADDP78560 199 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 MXD1Q05195 221 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 MTAPQ13126 283 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 RNASE12Q5GAN4 147 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ZFP14Q9HCL3 533 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 CD2P06729 351 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 TNNI3P19429 210 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 PTPN11Q06124 597 aaPredicted RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 CDK18Q07002 472 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 CAMK1Q14012 370 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ZNF548Q8NEK5 533 aaPredicted RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 CST11Q9H112 138 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ADAMTS10Q9H324 1103 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 SNTG1Q9NSN8 517 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 OAZ3Q9UMX2 235 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 PREX1Q8TCU6 1659 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 LOC100130705A0A1B0GUX0 176 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 FSCN2O14926 492 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHD1-212ENST00000614616 ZNF81P51508 661 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 ANKDD1AQ495B1 522 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 BANPQ8N9N5 519 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 TCEAL4Q96EI5 215 aa13.71□□□□□ -0.21
CHD1-212ENST00000614616 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
CHD1-212ENST00000614616 RBM22Q9NW64 420 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms