RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SEMA4AQ9H3S1 761 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 SUDS3Q9H7L9 328 aaPredicted RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 VPS37BQ9H9H4 285 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 C20orf96Q9NUD7 363 aaPredicted RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 NINJ2Q9NZG7 142 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 HS3ST3A1Q9Y663 406 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 CCDC151A5D8V7 595 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 FPGTO14772 594 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 RHOBTB1O94844 696 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 GOT2P00505 430 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 ITGALP20701 1170 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 CD27P26842 260 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 SSTR1P30872 391 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 GPR1P46091 355 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 ARCN1P48444 511 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 CACNG1Q06432 222 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 SRSF5Q13243 272 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 THOC5Q13769 683 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 CHRNA6Q15825 494 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 FASTKD1Q53R41 847 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 ZRANB3Q5FWF4 1079 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 RAET1GQ6H3X3 334 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 PNCKQ6P2M8 343 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 CAPN12Q6ZSI9 719 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 SNX20Q7Z614 316 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 PTAR1Q7Z6K3 402 aaPredicted RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 LMNTD2Q8IXW0 634 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 CAVIN3Q969G5 261 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
CD48-203ENST00000613788 CERS2Q96G23 380 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 HSPA12BQ96MM6 686 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 KLF6Q99612 283 aaPredicted RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 TTC1Q99614 292 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 TXLNGYQ9BZA5 131 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 ASB8Q9H765 288 aa14.62□□□□□ -0.07
CD48-203ENST00000613788 PPANQ9NQ55 473 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 MBNL1Q9NR56 388 aaKnown RBP14.62□□□□□ -0.07
CD48-203ENST00000613788 DLL1O00548 723 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 GAPDHSO14556 408 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 RAD51BO15315 384 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 LILRB5O75023 590 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PCCBP05166 539 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ARNTP27540 789 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TEAD1P28347 426 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 STX2P32856 288 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PPARGP37231 505 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 GPX6P59796 221 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 NFATC2Q13469 925 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 STAT4Q14765 748 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 IRF4Q15306 451 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PMS2CLQ68D20 193 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 MRNIPQ6NTE8 343 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 NEPROQ6NW34 567 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ZNF449Q6P9G9 518 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ZC3H14Q6PJT7 736 aaKnown RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 SDCCAG8Q86SQ7 713 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 KCNMB4Q86W47 210 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 SLC41A1Q8IVJ1 513 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 FAM174AQ8TBP5 190 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ULK4Q96C45 1275 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 SERAC1Q96JX3 654 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ZC3H10Q96K80 434 aaKnown RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 EBF2Q9HAK2 575 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PLAC1Q9HBJ0 212 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 FZD3Q9NPG1 666 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 MOCS1Q9NZB8 636 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 NUMA1Q14980 2115 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PLXND1Q9Y4D7 1925 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TRPM6Q9BX84 2022 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 OR51F1A6NGY5 319 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 AGAP14A8MT82 685 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TOR1BO14657 336 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PFDN6O15212 129 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 CD3EAPO15446 510 aaKnown RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A9O60656 530 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ACSL3O95573 720 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A6P19224 532 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A1P22309 533 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A4P22310 534 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A3P35503 534 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 UGT1A5P35504 534 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TRIM23P36406 574 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 DHPSP49366 369 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 SIM2Q14190 667 aaPredicted RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 INPP5AQ14642 412 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PLK5Q496M5 336 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ATP13A5Q4VNC0 1218 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 HSP90AA5PQ58FG0 334 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 AARS2Q5JTZ9 985 aaKnown RBP14.61□□□□□ -0.07
CD48-203ENST00000613788 LYPLAL1Q5VWZ2 237 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 ADAMTSL4Q6UY14 1074 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 CERS6Q6ZMG9 384 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 TAS2R42Q7RTR8 314 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 RGL4Q8IZJ4 473 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 OTUD6BQ8N6M0 293 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 PLA2G15Q8NCC3 412 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 GPR150Q8NGU9 434 aa14.61□□□□□ -0.07
CD48-203ENST00000613788 BTN2A2Q8WVV5 523 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms