RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RSPO2Q6UXX9 243 aaPredicted RBP21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 EPHX4Q8IUS5 362 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 AFAP1L2Q8N4X5 818 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 DHRSXQ8N5I4 330 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 SNX31Q8N9S9 440 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 UBA3Q8TBC4 463 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 SPPL3Q8TCT6 385 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 CANT1Q8WVQ1 401 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 MCMBPQ9BTE3 642 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 RAB6CQ9H0N0 254 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 DHX35Q9H5Z1 703 aaKnown RBP21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 HMG20AQ9NP66 347 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 NSMCE4AQ9NXX6 385 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 C1orf232A0A0U1RR37 186 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 RPL10P27635 214 aaKnown RBP21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 SDC4P31431 198 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 ERVFC1P60507 584 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 PSMD5Q16401 504 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 GOLGA7BQ2TAP0 167 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 FAM182AQ5T1J6 154 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 USP51Q70EK9 711 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 NANOGNBQ7Z5D8 188 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 LEMD2Q8NC56 503 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 B3GALNT2Q8NCR0 500 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 TNIP3Q96KP6 325 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 C1QTNF1Q9BXJ1 281 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 NAA50Q9GZZ1 169 aaKnown RBP21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 RAD21L1Q9H4I0 556 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 NGRNQ9NPE2 291 aaKnown RBP21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 TSPAN16Q9UKR8 245 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 ERVK-11Q9UQG0 969 aa21.89■■□□□ 1.09
POLR2J3-220ENST00000613744 C5orf67F2Z3F1 127 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 MRASO14807 208 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 MBL2P11226 248 aaPredicted RBP21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 ADORA2BP29275 332 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 GMPRP36959 345 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 GLUD2P49448 558 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 NEK2P51955 445 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 NAGLUP54802 743 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 ATP6V0D1P61421 351 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 SMAD3P84022 425 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 BNIP2Q12982 314 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 FASTKQ14296 549 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 TBCELQ5QJ74 424 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 PRMT9Q6P2P2 845 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 CYP2R1Q6VVX0 501 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 TMEM135Q86UB9 458 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 THEM5Q8N1Q8 247 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 S100ZQ8WXG8 99 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 MARK4Q96L34 752 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 C11orf84Q9BUA3 381 aaPredicted RBP21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 TASP1Q9H6P5 420 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 TLK1Q9UKI8 766 aa21.88■■□□□ 1.09
POLR2J3-220ENST00000613744 E2F8A0AVK6 867 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 ADAM12O43184 909 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 OAZ2O95190 189 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 NFKBIAP25963 317 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 ATP4BP51164 291 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 GNA12Q03113 381 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 OCA2Q04671 838 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 GPM6BQ13491 265 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 NEK10Q6ZWH5 1172 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 TCF25Q9BQ70 676 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 HERC2P3Q9BVR0 1158 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 RHOBTB2Q9BYZ6 727 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 KIAA1257Q9ULG3 409 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 RNF103-CHMP3A0A140T963 221 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 MYBPHLA2RUH7 354 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 TARM1B6A8C7 271 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 H0YAE9 185 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 URODP06132 367 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 SBK3P0C264 359 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 TFE3P19532 575 aaPredicted RBP21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 PCYT1AP49585 367 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 CCT8P50990 548 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 RALGDSQ12967 914 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 MRPL58Q14197 206 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 PLPP4Q5VZY2 271 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 LRRTM3Q86VH5 581 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 CRYBG2Q8N1P7 616 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 TMCO5AQ8N6Q1 288 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 PTCD2Q8WV60 388 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 FCRL3Q96P31 734 aaPredicted RBP21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 ZBP1Q9H171 429 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 TPK1Q9H3S4 243 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 CRTAC1Q9NQ79 661 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 ENTPD7Q9NQZ7 604 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 SMPD3Q9NY59 655 aaPredicted RBP21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 DTLQ9NZJ0 730 aa21.87■■□□□ 1.09
POLR2J3-220ENST00000613744 DHRS12A0PJE2 317 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 CARNS1A5YM72 827 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 BBIP1A8MTZ0 92 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 FAM47E-STBD1D6RA91 191 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 JUNP05412 331 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 IRS1P35568 1242 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 GRIA3P42263 894 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 POLD2P49005 469 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 NME3Q13232 169 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 CAMK1Q14012 370 aa21.86■■□□□ 1.09
POLR2J3-220ENST00000613744 ZNF280DQ6N043 979 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms