RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ANKRD42Q8N9B4 389 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MCUQ8NE86 351 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 FBF1Q8TES7 1133 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MZB1Q8WU39 189 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 DYDC1Q8WWB3 177 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ASB12Q8WXK4 309 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SKA1Q96BD8 255 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SLC17A9Q9BYT1 436 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CEP41Q9BYV8 373 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 RASSF4Q9H2L5 321 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TRABDQ9H4I3 376 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 EBF2Q9HAK2 575 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 GLOD4Q9HC38 313 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CAPN10Q9HC96 672 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TM9SF3Q9HD45 589 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 RAB6BQ9NRW1 208 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 NKIRAS1Q9NYS0 192 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 KLHL8Q9P2G9 620 aaPredicted RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 ZFR2Q9UPR6 939 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 PPIL1Q9Y3C6 166 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ADAMTS9Q9P2N4 1935 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PATE3B3GLJ2 98 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TCP11X1B4DZS4 312 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PRAMEF26H0Y7S4 382 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SPINT1O43278 529 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TYROBPO43914 113 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SNX3O60493 162 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TM7SF2O76062 418 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 STK10O94804 968 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 C1QAP02745 245 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CFIP05156 583 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SYPP08247 313 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MMP2P08253 660 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CYP2A6P11509 494 aaPredicted RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 HNRNPA2B1P22626 353 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 CD38P28907 300 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 AKT2P31751 481 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MMP12P39900 470 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ELK3P41970 407 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CD86P42081 329 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MAGEA3P43357 314 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 GRIA4P48058 902 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 WDR4P57081 412 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 RPL26P61254 145 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 IRX4P78413 519 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SGCGQ13326 291 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 LRRC73Q5JTD7 316 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SEL1L3Q68CR1 1132 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 ITPRIPL1Q6GPH6 555 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 NAPEPLDQ6IQ20 393 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 RGS9BPQ6ZS82 235 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CCDC121Q6ZUS5 278 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 DPPA4Q7L190 304 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PID1Q7Z2X4 250 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CAND1Q86VP6 1230 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 ZNF567Q8N184 647 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 AGGF1Q8N302 714 aaeCLIP8.83□□□□□ -1
SMAD4-217ENST00000611848 TAB3Q8N5C8 712 aaPredicted RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.83□□□□□ -1
SMAD4-217ENST00000611848 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 MGARPQ8TDB4 240 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 DCAKDQ8WVC6 231 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 PIH1D2Q8WWB5 315 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CCT6BQ92526 530 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 LRRC39Q96DD0 335 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SCRN2Q96FV2 425 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 IMP4Q96G21 291 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 SERAC1Q96JX3 654 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 LENG8Q96PV6 779 aaPredicted RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 CYTH2Q99418 400 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 C1QTNF2Q9BXJ5 285 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 TDRD1Q9BXT4 1180 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 ZDHHC5Q9C0B5 715 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SMOC1Q9H4F8 434 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 SAMD15Q9P1V8 674 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 GGT7Q9UJ14 662 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 RPL26L1Q9UNX3 145 aaKnown RBP8.83□□□□□ -1
SMAD4-217ENST00000611848 ITM2BQ9Y287 266 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 HS3ST3A1Q9Y663 406 aa8.83□□□□□ -1
SMAD4-217ENST00000611848 CNOT1A5YKK6 2376 aaKnown RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 IGLON5A6NGN9 336 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 CCT8L1PA6NM43 557 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ARHGAP33O14559 1287 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 SLC31A1O15431 190 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 MAGEC1O60732 1142 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 MMP20O60882 483 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 FAM155BO75949 473 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 PAK4O96013 591 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 PDHA1P08559 390 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 GSTA2P09210 222 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 KRT15P19012 456 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TPSB2P20231 275 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TAC1P20366 129 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 STX2P32856 288 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 CD68P34810 354 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 MSH2P43246 934 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 EPHB1P54762 984 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ARHGAP8P85298 464 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 IL9RQ01113 521 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ACTN3Q08043 901 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms