RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 UBA6A0AVT1 1052 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CARNS1A5YM72 827 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 H3BMM5 538 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 UBXN8O00124 270 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 FBP2O00757 339 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MRASO14807 208 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TRIM24O15164 1050 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 ADAM12O43184 909 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 AOC2O75106 756 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CLASP2O75122 1294 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MATN4O95460 622 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 STAMBPO95630 424 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MLYCDO95822 493 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 KLKB1P03952 638 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 C8BP07358 591 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PIRTP0C851 137 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PKMP14618 531 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 LBPP18428 481 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 GPX3P22352 226 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 FMO4P31512 558 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PTGER3P43115 390 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RGRP47804 291 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 AQP4P55087 323 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RHDQ02161 417 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 GRM2Q14416 872 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TAF12Q16514 161 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PFKFB4Q16877 469 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 GRAMD1BQ3KR37 738 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 OGFOD2Q6N063 350 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 KIAA1841Q6NSI8 718 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 NCEH1Q6PIU2 408 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PAQR3Q6TCH7 311 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 SPATA19Q7Z5L4 167 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TMEM173Q86WV6 379 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TICAM1Q8IUC6 712 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 ST13P4Q8IZP2 240 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CHCHD4Q8N4Q1 142 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MDGA1Q8NFP4 955 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 IGSF21Q96ID5 467 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 AKTIPQ9H8T0 292 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MID1IP1Q9NPA3 183 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CCDC167Q9P0B6 97 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TMEM181Q9P2C4 612 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CD300AQ9UGN4 299 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RIMS3Q9UJD0 308 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MAFFQ9ULX9 164 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 E7ENX8 843 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CBX4O00257 560 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 STX7O15400 261 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 ESR1P03372 595 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RPS17P08708 135 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 IDO1P14902 403 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PAX7P23759 505 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CDH13P55290 713 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 IL2P60568 153 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MRPS22P82650 360 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 FOLH1Q04609 750 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CLCQ05315 142 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 VEPH1Q14D04 833 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PPP1R3AQ16821 1122 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PTPRNQ16849 979 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 LRRC36Q1X8D7 754 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RNF219Q5W0B1 726 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CXorf57Q6NSI4 855 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CERS6Q6ZMG9 384 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 RPS27LQ71UM5 84 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MIER2Q8N344 545 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MARVELD2Q8N4S9 558 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PNPLA1Q8N8W4 532 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 GOLM1Q8NBJ4 401 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 LPCAT1Q8NF37 534 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TWIST2Q8WVJ9 160 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 KCNJ9Q92806 393 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 PDLIM5Q96HC4 596 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 BIRC8Q96P09 236 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 CLSTN3Q9BQT9 956 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MUC3BQ9H195 1237 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 HCSTQ9UBK5 93 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TRMT6Q9UJA5 497 aaKnown RBP10.39□□□□□ -0.75
PABPC1-224ENST00000610907 MED16Q9Y2X0 877 aa10.39□□□□□ -0.75
PABPC1-224ENST00000610907 TYW5A2RUC4 315 aaKnown RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 EIF4E1BA6NMX2 242 aaKnown RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 SUPT3HB4E1H0 165 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 RNASEH1O60930 286 aaKnown RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 SUPT3HO75486 399 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 ECI2O75521 394 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 SIX3O95343 332 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 SEC24AO95486 1093 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 ESRRBO95718 433 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 CHEK2O96017 543 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 SOD2P04179 222 aa10.38□□□□□ -0.75
PABPC1-224ENST00000610907 UBTFL6P0CB48 400 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 EEF1DP29692 281 aaKnown RBP10.38□□□□□ -0.75
PABPC1-224ENST00000610907 MC4RP32245 332 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms