RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MYO19Q96H55 970 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF333Q96JL9 665 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 BIRC8Q96P09 236 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 C1QTNF3Q9BXJ4 246 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 LRRC3Q9BY71 257 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 MRPL40Q9NQ50 206 aaKnown RBP11.9□□□□□ -0.5
USP6NL-206ENST00000609853 ACSS2Q9NR19 701 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 IL17CQ9P0M4 197 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 TRMT6Q9UJA5 497 aaKnown RBP11.9□□□□□ -0.5
USP6NL-206ENST00000609853 RNF112Q9ULX5 631 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF711Q9Y462 761 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
USP6NL-206ENST00000609853 COPG1Q9Y678 874 aaKnown RBP11.9□□□□□ -0.5
USP6NL-206ENST00000609853 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 TMEM233B4DJY2 109 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 UBDO15205 165 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 KLK8O60259 260 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 VPS4BO75351 444 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 GPC4O75487 556 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 CYBBP04839 570 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 JUNP05412 331 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MTHFD2P13995 350 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 GFAPP14136 432 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ACADSP16219 412 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ATP6V1C1P21283 382 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 GJA8P48165 433 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 NUDT2P50583 147 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PTPN5P54829 565 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 BCL2L1Q07817 233 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PEX6Q13608 980 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 OR4D1Q15615 310 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 EFL1Q7Z2Z2 1120 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 TMC8Q8IU68 726 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 DSELQ8IZU8 1212 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PGAM4Q8N0Y7 254 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 RYBPQ8N488 228 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 FIBCD1Q8N539 461 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 DNAJC9Q8WXX5 260 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PDLIM5Q96HC4 596 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 CATSPER2Q96P56 530 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PFDN4Q9NQP4 134 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ABCB8Q9NUT2 735 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MED16Q9Y2X0 877 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 SLC30A1Q9Y6M5 507 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 H3BMM5 538 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 AIM2O14862 343 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 IGSF6O95976 241 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ANPEPP15144 967 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 DDX6P26196 483 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ACADVLP49748 655 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 IL2P60568 153 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 HTRA4P83105 476 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ZXDBP98169 803 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 LCP2Q13094 533 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ART3Q13508 389 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 LRRC26Q2I0M4 334 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 SETMARQ53H47 684 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 FBXO39Q8N4B4 442 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PNPLA1Q8N8W4 532 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MAB21L3Q8N8X9 362 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ISG20Q96AZ6 181 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 GPR21Q99679 349 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 EMILIN2Q9BXX0 1053 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 MRPL1Q9BYD6 325 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 ATP13A3Q9H7F0 1226 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 CFAP97Q9P2B7 532 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 POMPQ9Y244 141 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 FAM50BQ9Y247 325 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 FCF1Q9Y324 198 aaKnown RBP11.89□□□□□ -0.51
USP6NL-206ENST00000609853 IRAK3Q9Y616 596 aa11.89□□□□□ -0.51
USP6NL-206ENST00000609853 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 UBXN8O00124 270 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 UBFD1O14562 309 aaKnown RBP11.88□□□□□ -0.51
USP6NL-206ENST00000609853 PRMT5O14744 637 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-206ENST00000609853 MAP3K7O43318 606 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 CXCL14O95715 111 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 MLYCDO95822 493 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 C8AP07357 584 aa11.88□□□□□ -0.51
USP6NL-206ENST00000609853 RPS3P23396 243 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms