RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DSG4Q86SJ6 1040 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 CCDC63Q8NA47 563 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF473Q8WTR7 871 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 UBE2ZQ9H832 354 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 MANSC1Q9H8J5 431 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 FBRSL1Q9HCM7 1045 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 PCDH12Q9NPG4 1184 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 RUVBL2Q9Y230 463 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 GLYATL1P3A0A0U1RQE8 302 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 UBA6A0AVT1 1052 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 C2CD4DB7Z1M9 353 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 KPNA3O00505 521 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 GAPDHSO14556 408 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PRAMEF1O95521 474 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 APOA4P06727 396 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 BPGMP07738 259 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ADARP55265 1226 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 GPR33Q49SQ1 333 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 EGFLAMQ63HQ2 1017 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PIP4K2CQ8TBX8 421 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 CCDC68Q9H2F9 335 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ASB8Q9H765 288 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 POPDC3Q9HBV1 291 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF358Q9NW07 568 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 SARDHQ9UL12 918 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 COMMD10Q9Y6G5 202 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 MUC22E2RYF6 1773 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 C1SP09871 688 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 FDXRP22570 491 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ITGB7P26010 798 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 FMO4P31512 558 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 GMPRP36959 345 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 SLC26A3P40879 764 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 SPINT3P49223 89 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 CDKN2DP55273 166 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 NFATC2Q13469 925 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ENPP2Q13822 863 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 CHRNA6Q15825 494 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 TSNAXIP1Q2TAA8 658 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 LRRC73Q5JTD7 316 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ERAP2Q6P179 960 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 DPPA4Q7L190 304 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 TBC1D1Q86TI0 1168 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 NUDCD3Q8IVD9 361 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 GPR26Q8NDV2 337 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF398Q8TD17 642 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PPP1R16AQ96I34 528 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PLEKHG4BQ96PX9 1271 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 NMRAL1Q9HBL8 299 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PRSS16Q9NQE7 514 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 RAD18Q9NS91 495 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 PKD2L2Q9NZM6 624 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 STON1Q9Y6Q2 735 aa17.57■□□□□ 0.4
SHKBP1-224ENST00000600718 TRBV5-4A0A0C4DH59 114 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 KLHL2O95198 593 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 EPHX1P07099 455 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 SUOXP51687 545 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 KPNA2P52292 529 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 PGGT1BP53609 377 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF460Q14592 562 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 PARS2Q7L3T8 475 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 CENPLQ8N0S6 344 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 RAB3IL1Q8TBN0 382 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 KCTD4Q8WVF5 259 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 ACOX2Q99424 681 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 GPAMQ9HCL2 828 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 CACNA2D2Q9NY47 1150 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 SIRPGQ9P1W8 387 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 MID2Q9UJV3 735 aa17.56■□□□□ 0.4
SHKBP1-224ENST00000600718 SPECC1L-ADORA2AF8WAN1 911 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 K7EQS6 105 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 KLF11O14901 512 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 WISP3O95389 354 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 IRX4P78413 519 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 CCDC85BQ15834 202 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 POM121L1PQ3SYA9 428 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 SERPINA9Q86WD7 417 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 NXNL1Q96CM4 212 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 PITPNM3Q9BZ71 974 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 C8orf33Q9H7E9 229 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 FGFR1OP2Q9NVK5 253 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 GEMIN8Q9NWZ8 242 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 RGSL1A5PLK6 1076 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 AGAP14A8MT82 685 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 IL1BP01584 269 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 ESR1P03372 595 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 PKMP14618 531 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 CPA3P15088 417 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 CD9P21926 228 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 CTHP32929 405 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 FAM83EQ2M2I3 478 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 AGAP9Q5VTM2 703 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 ATG16L1Q676U5 607 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 RALGPS2Q86X27 583 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF513Q8N8E2 541 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 RDH11Q8TC12 318 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 ARRDC3Q96B67 414 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms