RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RASGRP1O95267 797 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 BPIP17213 487 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 HLA-DPA1P20036 260 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 KELP23276 732 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 EPHB1P54762 984 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 GDF10P55107 478 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 NAP1L1P55209 391 aaKnown RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 NR1D2Q14995 579 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 ELOCQ15369 112 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 HS1BP3Q53T59 392 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PDPK2PQ6A1A2 396 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 DRICH1Q6PGQ1 229 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 ENPP7Q6UWV6 458 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PID1Q7Z2X4 250 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 TMPRSS12Q86WS5 348 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 HID1Q8IV36 788 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 SLC35F3Q8IY50 421 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PAF1Q8N7H5 531 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 DCBLD1Q8N8Z6 715 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 TTC13Q8NBP0 860 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 ATL2Q8NHH9 583 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 AP2M1Q96CW1 435 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 SPATA13Q96N96 652 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 FAM118BQ9BPY3 351 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 RIOK2Q9BVS4 552 aaKnown RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 FRMD8P1Q9BZ68 369 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 SLC13A1Q9BZW2 595 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 TMEM168Q9H0V1 697 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 MRPL40Q9NQ50 206 aaKnown RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PHPT1Q9NRX4 125 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 UBP1Q9NZI7 540 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 NCKIPSDQ9NZQ3 722 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 SEPT10Q9P0V9 454 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 VPS18Q9P253 973 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 KLQ9UEF7 1012 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 ZNF711Q9Y462 761 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 TTLL3Q9Y4R7 772 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PCYT1BQ9Y5K3 369 aaPredicted RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 OAS3Q9Y6K5 1087 aaKnown RBP8.74□□□□□ -1.01
SSBP4-208ENST00000600628 PIKFYVEQ9Y2I7 2098 aa8.74□□□□□ -1.01
SSBP4-208ENST00000600628 FAM149AA5PLN7 773 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 A6NCN8 305 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 H7C0C1 242 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 CACNB4O00305 520 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 NTN3O00634 580 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 CHUKO15111 745 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 LIASO43766 372 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 PMPCBO75439 489 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 FGF1P05230 155 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 PIRTP0C851 137 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ALPPL2P10696 532 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 PSMB4P28070 264 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 CETN2P41208 172 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 CHRNA4P43681 627 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ATP5OP48047 213 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 POLD2P49005 469 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 E2F1Q01094 437 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 INSM1Q01101 510 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 DEFB133Q30KQ1 61 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 PYCR3Q53H96 274 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 FAXCQ5TGI0 409 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ITPRIPL1Q6GPH6 555 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ZNF438Q7Z4V0 828 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 MARCH9Q86YJ5 346 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 CDKL3Q8IVW4 592 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 LMX1AQ8TE12 382 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 VPS35Q96QK1 796 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ZSCAN5AQ9BUG6 496 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 FAM83DQ9H4H8 585 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 IL26Q9NPH9 171 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 RAD18Q9NS91 495 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 PKD2L2Q9NZM6 624 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 HACD3Q9P035 362 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 KLHL8Q9P2G9 620 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 TTC7AQ9ULT0 858 aaPredicted RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 SUFUQ9UMX1 484 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 URB1O60287 2271 aaKnown RBP8.73□□□□□ -1.01
SSBP4-208ENST00000600628 ZFYVE26Q68DK2 2539 aa8.73□□□□□ -1.01
SSBP4-208ENST00000600628 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 GPR89AB7ZAQ6 455 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 KCNN4O15554 427 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 OPA1O60313 960 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PPFIA2O75334 1257 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 ANXA9O76027 345 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 METTL18O95568 372 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 AGTP01019 485 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 TNFP01375 233 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 GPR89BP0CG08 455 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 JUPP14923 745 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PNLIPP16233 465 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 STIP1P31948 543 aaKnown RBP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CA5AP35218 305 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 ADCY8P40145 1251 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 GPR1P46091 355 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms