RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 HMG20AQ9NP66 347 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 USP22Q9UPT9 525 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 CCDC162PA2VCL2 907 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 TOR1BO14657 336 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 RBP1P09455 135 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 KCNC1P48547 511 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 PIGFQ07326 219 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 DNASE1L3Q13609 305 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 POLD3Q15054 466 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 ZNF678Q5SXM1 525 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 MARCH8Q5T0T0 291 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 IQSEC1Q6DN90 963 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 KDELC2Q7Z4H8 507 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 SLC22A9Q8IVM8 553 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 CRYBG2Q8N1P7 616 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 PARP8Q8N3A8 854 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 ALG9Q9H6U8 611 aa19.27■□□□□ 0.68
ARHGEF1-218ENST00000599589 FNDC1Q4ZHG4 1894 aaPredicted RBP19.27■□□□□ 0.67
ARHGEF1-218ENST00000599589 PPP6CO00743 305 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 TSPAN1O60635 241 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 XYLBO75191 536 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 BEST1O76090 585 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CRHBPP24387 322 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 DNAJB2P25686 324 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 GSTM2P28161 218 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 LIPEQ05469 1076 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 SNX17Q15036 470 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 GEN1Q17RS7 908 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 FAM110CQ1W6H9 321 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 SLC16A12Q6ZSM3 486 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 PAPD5Q8NDF8 572 aaKnown RBP19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 SLC22A17Q8WUG5 538 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 RNF145Q96MT1 663 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 PIF1Q9H611 641 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 DNMT3BQ9UBC3 853 aaKnown RBP19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 VPS51Q9UID3 782 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 TSC2P49815 1807 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CLDN5O00501 218 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 PIP5K1BO14986 540 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 SH3BP2P78314 561 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 NFYCQ13952 458 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CBX2Q14781 532 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 PGS1Q32NB8 556 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 DENND5AQ6IQ26 1287 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CLYBLQ8N0X4 340 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CHID1Q9BWS9 393 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 PCDHGA11Q9Y5H2 935 aa19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 MAGED1Q9Y5V3 778 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF1-218ENST00000599589 CES1P23141 567 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 HTR1BP28222 390 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 RABGGTBP53611 331 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 RPS6KA2Q15349 733 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 PHKG1Q16816 387 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 IMPG1Q17R60 797 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 UNC50Q53HI1 259 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 SPRYD7Q5W111 196 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 ZFP90Q8TF47 636 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 OSCP1Q8WVF1 389 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 EXT2Q93063 718 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 BIRC7Q96CA5 298 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 MAGED4Q96JG8 741 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 WDR12Q9GZL7 423 aaKnown RBP19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 WDR6Q9NNW5 1121 aaKnown RBP19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 AKIP1Q9NQ31 210 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 SNTG2Q9NY99 539 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 H3BMM5 538 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 PFDN6O15212 129 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 KPNA6O60684 536 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 FOXA1P55317 472 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 TRIM32Q13049 653 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 ACAP2Q15057 778 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 AGAP7PQ5VUJ5 663 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 NEPROQ6NW34 567 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 DSG4Q86SJ6 1040 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 C2orf69Q8N8R5 385 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 VPS33AQ96AX1 596 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 TMEM74Q96NL1 305 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 TRMOQ9BU70 441 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 BDH2Q9BUT1 245 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 ATXN3LQ9H3M9 355 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 PCDH12Q9NPG4 1184 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 MTRRQ9UBK8 725 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
ARHGEF1-218ENST00000599589 PSMD3O43242 534 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 RCVRNP35243 200 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 CHRNA4P43681 627 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 LEPRP48357 1165 aaKnown RBP19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 ARSFP54793 590 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 ARHGAP36Q6ZRI8 547 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 PTRH1Q86Y79 214 aaKnown RBP19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 DCP1BQ8IZD4 617 aaKnown RBP19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 LEMD2Q8NC56 503 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 TWIST2Q8WVJ9 160 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 TRIM54Q9BYV2 358 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 PLEKHA5Q9HAU0 1116 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 LTB4R2Q9NPC1 389 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 AAR2Q9Y312 384 aaKnown RBP19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 OAS3Q9Y6K5 1087 aaKnown RBP19.24■□□□□ 0.67
ARHGEF1-218ENST00000599589 ZSWIM8A7E2V4 1837 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms