RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TMEM184BQ9Y519 407 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 PCYT1BQ9Y5K3 369 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 USP9YO00507 2555 aaPredicted RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 RELNP78509 3460 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 TRBV23OR9-2A0A075B6M9 112 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 A6NCN8 305 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 LRRC10BA6NIK2 292 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 A8MU76 341 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 RNF8O76064 485 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 STK17BO94768 372 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 DLGAP3O95886 979 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 PDHA1P08559 390 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 ATP1A3P13637 1013 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 FERP16591 822 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 AMPD1P23109 780 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 NFKBIAP25963 317 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 IL1R2P27930 398 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 STC1P52823 247 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 HHEXQ03014 270 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 ABHD18Q0P651 414 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 DPYSL2Q16555 572 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 CRTC2Q53ET0 693 aaPredicted RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 RALGPS1Q5JS13 557 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 SNAP47Q5SQN1 464 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 ARMC12Q5T9G4 340 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 LRRC66Q68CR7 880 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 CEACAM20Q6UY09 585 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 MARK2Q7KZI7 788 aaKnown RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 APOBEC4Q8WW27 367 aaKnown RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 STARD8Q92502 1023 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 KIAA1143Q96AT1 154 aaPredicted RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 AP2M1Q96CW1 435 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 AHCYL2Q96HN2 611 aaKnown RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 PSMG3-AS1Q96PY0 264 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 AGAP2Q99490 1192 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 ZPBPQ9BS86 351 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 EFHD1Q9BUP0 239 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 SARS2Q9NP81 518 aaKnown RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 SIDT1Q9NXL6 827 aaKnown RBP9.9□□□□□ -0.82
LIG1-209ENST00000596104 TBC1D29Q9UFV1 150 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 CD84Q9UIB8 345 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 PLAAQ9Y263 795 aa9.9□□□□□ -0.82
LIG1-209ENST00000596104 PRR19A6NJB7 356 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 H3BRJ5 948 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 DNAJC6O75061 913 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 TCF4P15884 667 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 F8A1P23610 371 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 MAN1A1P33908 653 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 PCK1P35558 622 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 STAT5AP42229 794 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 MMP13P45452 471 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 PTSQ03393 145 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 UBXN1Q04323 297 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 IHHQ14623 411 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 NCAPHQ15003 741 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 DEFB109BQ30KR1 87 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 LACTB2Q53H82 288 aaPredicted RBP9.89□□□□□ -0.83
LIG1-209ENST00000596104 ATP1A1-AS1Q5TC04 95 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 MARC1Q5VT66 337 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 PPP1R2P3Q6NXS1 205 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 IYDQ6PHW0 289 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 TMCO3Q6UWJ1 677 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 POLNQ7Z5Q5 900 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 GALNT13Q8IUC8 556 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 BBS5Q8N3I7 341 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 FAM26EQ8N5C1 309 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 TEX26Q8N6G2 289 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 NCSTNQ92542 709 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 MIB2Q96AX9 1013 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 CSPG4P5Q96PW8 444 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 ZMYND15Q9H091 742 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 TRIT1Q9H3H1 467 aaKnown RBP9.89□□□□□ -0.83
LIG1-209ENST00000596104 VPS18Q9P253 973 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 CNOT6Q9ULM6 557 aaKnown RBP9.89□□□□□ -0.83
LIG1-209ENST00000596104 PRKAB1Q9Y478 270 aa9.89□□□□□ -0.83
LIG1-209ENST00000596104 OAS3Q9Y6K5 1087 aaKnown RBP9.89□□□□□ -0.83
LIG1-209ENST00000596104 ZFC3H1O60293 1989 aaKnown RBP9.88□□□□□ -0.83
LIG1-209ENST00000596104 USP9XQ93008 2570 aaPredicted RBP9.88□□□□□ -0.83
LIG1-209ENST00000596104 A0A0J9YYE9 177 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 K7EM74 188 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 INPP4BO15327 924 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 TRBC1P01850 177 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 PYGLP06737 847 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 CCDC172P0C7W6 258 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 ZNF30P17039 623 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 TCN2P20062 427 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 ARL4AP40617 200 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 CD97P48960 835 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 EPHA4P54764 986 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 CDH6P55285 790 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 MC1RQ01726 317 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 NFATC2Q13469 925 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 MAP7Q14244 749 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 SMTNL2Q2TAL5 461 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 RBM43Q6ZSC3 357 aaKnown RBP9.88□□□□□ -0.83
LIG1-209ENST00000596104 ATPAF2Q8N5M1 289 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 EXD1Q8NHP7 514 aa9.88□□□□□ -0.83
LIG1-209ENST00000596104 SH3KBP1Q96B97 665 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms