RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FADS2P1A8MWK0 482 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 H3BM21 787 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 KIF2AO00139 706 aaPredicted RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 TNFRSF10CO14798 259 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 TM4SF5O14894 197 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 INPP4BO15327 924 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SDC3O75056 442 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 PIAS2O75928 621 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 RASGRP1O95267 797 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 TPSB2P20231 275 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SPAM1P38567 509 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 PTGIRP43119 386 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 BLKP51451 505 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 TERF1P54274 439 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SRP54P61011 504 aaKnown RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 CDK16Q00536 496 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SEPT6Q14141 434 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 PTPRCAPQ14761 206 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 TPSAB1Q15661 275 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 ALG11Q2TAA5 492 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 CERCAMQ5T4B2 595 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 PDPK2PQ6A1A2 396 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 RD3Q7Z3Z2 195 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 GATAD2AQ86YP4 633 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 HID1Q8IV36 788 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 PHACTR4Q8IZ21 702 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 OR4K2Q8NGD2 314 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SETD7Q8WTS6 366 aaKnown RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 BTN2A2Q8WVV5 523 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 OR1E3Q8WZA6 343 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 TSACCQ96A04 125 aaPredicted RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 RTKNQ9BST9 563 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 CNOT6Q9ULM6 557 aaKnown RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 PNMA8BQ9ULN7 279 aaPredicted RBP14.27□□□□□ -0.13
LIG1-208ENST00000595758 TMEM131Q92545 1883 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 SPTBN4Q9H254 2564 aa14.27□□□□□ -0.13
LIG1-208ENST00000595758 GLYATL1P3A0A0U1RQE8 302 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 AP3B1O00203 1094 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 FLRT2O43155 660 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 LDB2O43679 373 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 SH3BP5O60239 455 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 URI1O94763 535 aaPredicted RBP14.26□□□□□ -0.13
LIG1-208ENST00000595758 TNFP01375 233 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DGKAP23743 735 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 ADCY8P40145 1251 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 MAGEA6P43360 314 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 ZNF140P52738 457 aaPredicted RBP14.26□□□□□ -0.13
LIG1-208ENST00000595758 HK3P52790 923 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DR1Q01658 176 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 KCNJ11Q14654 390 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 CHRNA6Q15825 494 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 INAVAQ3KP66 663 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DOK6Q6PKX4 331 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 FAM151BQ6UXP7 276 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 PIP4P1Q86T03 277 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 TRIM74Q86UV6 250 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 NAXDQ8IW45 347 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 SLC25A45Q8N413 288 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 SPATA4Q8NEY3 305 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DTX3LQ8TDB6 740 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 COX14Q96I36 57 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 C19orf43Q9BQ61 176 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 FRMD8Q9BZ67 464 aaPredicted RBP14.26□□□□□ -0.13
LIG1-208ENST00000595758 TCEAL2Q9H3H9 227 aaPredicted RBP14.26□□□□□ -0.13
LIG1-208ENST00000595758 FGF22Q9HCT0 170 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DLL3Q9NYJ7 618 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 SPASTQ9UBP0 616 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 APOBEC3BQ9UH17 382 aaKnown RBP14.26□□□□□ -0.13
LIG1-208ENST00000595758 ASIC3Q9UHC3 531 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 TMEM98Q9Y2Y6 226 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 DGKBQ9Y6T7 804 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
LIG1-208ENST00000595758 TCRBV7S3A2A0A539 114 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 SLC25A14O95258 325 aaPredicted RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 ASMTLO95671 621 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 CEACAM5P06731 702 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 HADHAP40939 763 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 GRK6P43250 576 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 POLD2P49005 469 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 NPY2RP49146 381 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 SESN2P58004 480 aaPredicted RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 SARNPP82979 210 aaKnown RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 PTK6Q13882 451 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 PUM1Q14671 1186 aaKnown RBP eCLIP14.25□□□□□ -0.132e-9■■□□□ 12.1
LIG1-208ENST00000595758 ATP13A5Q4VNC0 1218 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 CCDC38Q502W7 563 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 PRRT3Q5FWE3 981 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 KCTD16Q68DU8 428 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 SYDE1Q6ZW31 735 aaPredicted RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 KANSL1Q7Z3B3 1105 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 RBFAQ8N0V3 343 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 ZNF548Q8NEK5 533 aaPredicted RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 OR13C4Q8NGS5 318 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 LMX1AQ8TE12 382 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 CPT1BQ92523 772 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms