RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CPZQ66K79 652 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 DOK6Q6PKX4 331 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 WDR74Q6RFH5 385 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 APLFQ8IW19 511 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 TP53INP2Q8IXH6 220 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 SLC30A5Q8TAD4 765 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 TBC1D31Q96DN5 1066 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 ELMO2Q96JJ3 720 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 PCDHB18PQ96TA0 734 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 TEX101Q9BY14 249 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 CBX8Q9HC52 389 aa13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 METTL5Q9NRN9 209 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-208ENST00000595726 RASA4BC9J798 803 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 J3KR12 359 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 INPP4BO15327 924 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 RASA4O43374 803 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 CREG1O75629 220 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 CCL11P51671 97 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 MAP7Q14244 749 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 ARCQ7LC44 396 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 PYROXD2Q8N2H3 581 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 Q8NA96 180 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 FNIP1Q8TF40 1166 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 COQ10AQ96MF6 247 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 NSMCE3Q96MG7 304 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 C11orf70Q9BRQ4 267 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 SLC25A23Q9BV35 468 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 PHPT1Q9NRX4 125 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 SIDT1Q9NXL6 827 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 TMEM98Q9Y2Y6 226 aa13.67□□□□□ -0.22
SHKBP1-208ENST00000595726 ZNF106Q9H2Y7 1883 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 KIAA0754O94854 1291 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 FERP16591 822 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 NSFP46459 744 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 FASLGP48023 281 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 SH3BP2P78314 561 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 CDK3Q00526 305 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 PTPRRQ15256 657 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 NR6A1Q15406 480 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 MARK2Q7KZI7 788 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 DPPA4Q7L190 304 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 SRLQ86TD4 932 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 PAF1Q8N7H5 531 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 NUS1Q96E22 293 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 RETREG1Q9H6L5 497 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 MLXIPLQ9NP71 852 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 UBA2Q9UBT2 640 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 MYO6Q9UM54 1294 aa13.66□□□□□ -0.22
SHKBP1-208ENST00000595726 A6NCN8 305 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SERPINC1P01008 464 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 GRM3Q14832 879 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 NR1I3Q14994 352 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 MON1BQ7L1V2 547 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SFRP1Q8N474 314 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 CT55Q8WUE5 264 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 ECHDC3Q96DC8 303 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 MOCOSQ96EN8 888 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 STAMBPL1Q96FJ0 436 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 C5orf34Q96MH7 638 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SYT11Q9BT88 431 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 UNKQ9C0B0 810 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 ATP13A3Q9H7F0 1226 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 AKIRIN1Q9H9L7 192 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SLAMF7Q9NQ25 335 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SEPT11Q9NVA2 429 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 B4GALT6Q9UBX8 382 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SLC5A6Q9Y289 635 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
SHKBP1-208ENST00000595726 TTC24A2A3L6 582 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms